###############################################################################################
############# Pfam MMSYN1_0001 START
###############################################################################################
# pfam_scan.pl, run at Mon Feb 13 18:31:55 2017
#
# Copyright (c) 2009 Genome Research Ltd
# Freely distributed under the GNU
# General Public License
#
# Authors: Jaina Mistry (jaina@ebi.ac.uk),
# Rob Finn (rdf@ebi.ac.uk)
#
# This is free software; you can redistribute it and/or modify it under
# the terms of the GNU General Public License as published by the Free Software
# Foundation; either version 2 of the License, or (at your option) any later version.
# This program is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
# FOR A PARTICULAR PURPOSE. See the GNU General Public License for more
# details.
#
# You should have received a copy of the GNU General Public License along with
# this program. If not, see .
# = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = =
# query sequence file: /home/ma745/minimalGenome/fastaFiles/MMSYN1/MMSYN1_0001.fasta
# searching against: /home/ma745/CAFA/pfam/pfamData/Pfam-A.hmm, with cut off --cut_ga
# resolve clan overlaps: on
# predict active sites: off
# = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = =
#
#
MMSYN1_0001 110 329 108 330 PF00308.16 Bac_DnaA Domain 3 218 219 295.6 2.3e-88 1 CL0023
MMSYN1_0001 358 426 358 426 PF08299.9 Bac_DnaA_C Domain 1 69 69 91.0 3.1e-26 1 CL0123
###############################################################################################
############# Pfam MMSYN1_0001 FINISH
###############################################################################################
###############################################################################################
############# Pfam MMSYN1_0002 START
###############################################################################################
# pfam_scan.pl, run at Mon Feb 13 18:30:56 2017
#
# Copyright (c) 2009 Genome Research Ltd
# Freely distributed under the GNU
# General Public License
#
# Authors: Jaina Mistry (jaina@ebi.ac.uk),
# Rob Finn (rdf@ebi.ac.uk)
#
# This is free software; you can redistribute it and/or modify it under
# the terms of the GNU General Public License as published by the Free Software
# Foundation; either version 2 of the License, or (at your option) any later version.
# This program is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
# FOR A PARTICULAR PURPOSE. See the GNU General Public License for more
# details.
#
# You should have received a copy of the GNU General Public License along with
# this program. If not, see .
# = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = =
# query sequence file: /home/ma745/minimalGenome/fastaFiles/MMSYN1/MMSYN1_0002.fasta
# searching against: /home/ma745/CAFA/pfam/pfamData/Pfam-A.hmm, with cut off --cut_ga
# resolve clan overlaps: on
# predict active sites: off
# = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = =
#
#
MMSYN1_0002 1 123 1 124 PF00712.17 DNA_pol3_beta Domain 1 120 121 116.1 8.8e-34 1 CL0060
MMSYN1_0002 134 247 133 247 PF02767.14 DNA_pol3_beta_2 Domain 2 116 116 118.0 2.3e-34 1 CL0060
MMSYN1_0002 251 371 249 372 PF02768.13 DNA_pol3_beta_3 Domain 3 120 121 123.9 2.7e-36 1 CL0060
###############################################################################################
############# Pfam MMSYN1_0002 FINISH
###############################################################################################
###############################################################################################
############# Pfam MMSYN1_0003 START
###############################################################################################
# pfam_scan.pl, run at Mon Feb 13 18:29:31 2017
#
# Copyright (c) 2009 Genome Research Ltd
# Freely distributed under the GNU
# General Public License
#
# Authors: Jaina Mistry (jaina@ebi.ac.uk),
# Rob Finn (rdf@ebi.ac.uk)
#
# This is free software; you can redistribute it and/or modify it under
# the terms of the GNU General Public License as published by the Free Software
# Foundation; either version 2 of the License, or (at your option) any later version.
# This program is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
# FOR A PARTICULAR PURPOSE. See the GNU General Public License for more
# details.
#
# You should have received a copy of the GNU General Public License along with
# this program. If not, see .
# = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = =
# query sequence file: /home/ma745/minimalGenome/fastaFiles/MMSYN1/MMSYN1_0003.fasta
# searching against: /home/ma745/CAFA/pfam/pfamData/Pfam-A.hmm, with cut off --cut_ga
# resolve clan overlaps: on
# predict active sites: off
# = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = =
#
#
MMSYN1_0003 6 81 6 92 PF01751.20 Toprim Family 1 97 103 36.0 5.8e-09 1 CL0413
MMSYN1_0003 95 174 95 175 PF13331.4 DUF4093 Family 1 82 83 50.3 2.2e-13 1 No_clan
###############################################################################################
############# Pfam MMSYN1_0003 FINISH
###############################################################################################
###############################################################################################
############# Pfam MMSYN1_0004 START
###############################################################################################
# pfam_scan.pl, run at Mon Feb 13 18:33:19 2017
#
# Copyright (c) 2009 Genome Research Ltd
# Freely distributed under the GNU
# General Public License
#
# Authors: Jaina Mistry (jaina@ebi.ac.uk),
# Rob Finn (rdf@ebi.ac.uk)
#
# This is free software; you can redistribute it and/or modify it under
# the terms of the GNU General Public License as published by the Free Software
# Foundation; either version 2 of the License, or (at your option) any later version.
# This program is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
# FOR A PARTICULAR PURPOSE. See the GNU General Public License for more
# details.
#
# You should have received a copy of the GNU General Public License along with
# this program. If not, see .
# = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = =
# query sequence file: /home/ma745/minimalGenome/fastaFiles/MMSYN1/MMSYN1_0004.fasta
# searching against: /home/ma745/CAFA/pfam/pfamData/Pfam-A.hmm, with cut off --cut_ga
# resolve clan overlaps: on
# predict active sites: off
# = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = =
#
#
MMSYN1_0004 2 261 1 263 PF00398.18 RrnaAD Domain 3 263 265 187.4 2.2e-55 1 CL0063
###############################################################################################
############# Pfam MMSYN1_0004 FINISH
###############################################################################################
###############################################################################################
############# Pfam MMSYN1_0005 START
###############################################################################################
# pfam_scan.pl, run at Mon Feb 13 18:33:36 2017
#
# Copyright (c) 2009 Genome Research Ltd
# Freely distributed under the GNU
# General Public License
#
# Authors: Jaina Mistry (jaina@ebi.ac.uk),
# Rob Finn (rdf@ebi.ac.uk)
#
# This is free software; you can redistribute it and/or modify it under
# the terms of the GNU General Public License as published by the Free Software
# Foundation; either version 2 of the License, or (at your option) any later version.
# This program is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
# FOR A PARTICULAR PURPOSE. See the GNU General Public License for more
# details.
#
# You should have received a copy of the GNU General Public License along with
# this program. If not, see .
# = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = =
# query sequence file: /home/ma745/minimalGenome/fastaFiles/MMSYN1/MMSYN1_0005.fasta
# searching against: /home/ma745/CAFA/pfam/pfamData/Pfam-A.hmm, with cut off --cut_ga
# resolve clan overlaps: on
# predict active sites: off
# = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = =
#
#
###############################################################################################
############# Pfam MMSYN1_0005 FINISH
###############################################################################################
###############################################################################################
############# Pfam MMSYN1_0006 START
###############################################################################################
# pfam_scan.pl, run at Mon Feb 13 18:33:37 2017
#
# Copyright (c) 2009 Genome Research Ltd
# Freely distributed under the GNU
# General Public License
#
# Authors: Jaina Mistry (jaina@ebi.ac.uk),
# Rob Finn (rdf@ebi.ac.uk)
#
# This is free software; you can redistribute it and/or modify it under
# the terms of the GNU General Public License as published by the Free Software
# Foundation; either version 2 of the License, or (at your option) any later version.
# This program is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
# FOR A PARTICULAR PURPOSE. See the GNU General Public License for more
# details.
#
# You should have received a copy of the GNU General Public License along with
# this program. If not, see .
# = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = =
# query sequence file: /home/ma745/minimalGenome/fastaFiles/MMSYN1/MMSYN1_0006.fasta
# searching against: /home/ma745/CAFA/pfam/pfamData/Pfam-A.hmm, with cut off --cut_ga
# resolve clan overlaps: on
# predict active sites: off
# = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = =
#
#
MMSYN1_0006 32 174 30 175 PF02518.24 HATPase_c Domain 3 110 111 65.2 6.5e-18 1 CL0025
MMSYN1_0006 221 390 221 391 PF00204.23 DNA_gyraseB Domain 1 174 175 193.1 2.5e-57 1 CL0329
MMSYN1_0006 419 530 419 531 PF01751.20 Toprim Family 1 102 103 67.1 1.2e-18 1 CL0413
MMSYN1_0006 563 623 561 623 PF00986.19 DNA_gyraseB_C Family 3 63 63 90.9 3.8e-26 1 No_clan
###############################################################################################
############# Pfam MMSYN1_0006 FINISH
###############################################################################################
###############################################################################################
############# Pfam MMSYN1_0007 START
###############################################################################################
# pfam_scan.pl, run at Mon Feb 13 18:29:15 2017
#
# Copyright (c) 2009 Genome Research Ltd
# Freely distributed under the GNU
# General Public License
#
# Authors: Jaina Mistry (jaina@ebi.ac.uk),
# Rob Finn (rdf@ebi.ac.uk)
#
# This is free software; you can redistribute it and/or modify it under
# the terms of the GNU General Public License as published by the Free Software
# Foundation; either version 2 of the License, or (at your option) any later version.
# This program is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
# FOR A PARTICULAR PURPOSE. See the GNU General Public License for more
# details.
#
# You should have received a copy of the GNU General Public License along with
# this program. If not, see .
# = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = =
# query sequence file: /home/ma745/minimalGenome/fastaFiles/MMSYN1/MMSYN1_0007.fasta
# searching against: /home/ma745/CAFA/pfam/pfamData/Pfam-A.hmm, with cut off --cut_ga
# resolve clan overlaps: on
# predict active sites: off
# = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = =
#
#
MMSYN1_0007 46 484 46 486 PF00521.18 DNA_topoisoIV Family 1 425 427 491.7 1.7e-147 1 No_clan
MMSYN1_0007 520 548 518 551 PF03989.11 DNA_gyraseA_C Repeat 3 31 48 23.9 1.8e-05 1 No_clan
MMSYN1_0007 567 617 567 618 PF03989.11 DNA_gyraseA_C Repeat 1 47 48 43.4 1.6e-11 1 No_clan
MMSYN1_0007 626 669 625 670 PF03989.11 DNA_gyraseA_C Repeat 2 47 48 47.7 7.1e-13 1 No_clan
MMSYN1_0007 673 717 673 719 PF03989.11 DNA_gyraseA_C Repeat 1 45 48 34.7 8e-09 1 No_clan
MMSYN1_0007 725 760 723 768 PF03989.11 DNA_gyraseA_C Repeat 3 38 48 34.8 7.3e-09 1 No_clan
MMSYN1_0007 774 817 774 819 PF03989.11 DNA_gyraseA_C Repeat 1 44 48 43.1 1.9e-11 1 No_clan
###############################################################################################
############# Pfam MMSYN1_0007 FINISH
###############################################################################################
###############################################################################################
############# Pfam MMSYN1_0008 START
###############################################################################################
# pfam_scan.pl, run at Mon Feb 13 18:30:11 2017
#
# Copyright (c) 2009 Genome Research Ltd
# Freely distributed under the GNU
# General Public License
#
# Authors: Jaina Mistry (jaina@ebi.ac.uk),
# Rob Finn (rdf@ebi.ac.uk)
#
# This is free software; you can redistribute it and/or modify it under
# the terms of the GNU General Public License as published by the Free Software
# Foundation; either version 2 of the License, or (at your option) any later version.
# This program is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
# FOR A PARTICULAR PURPOSE. See the GNU General Public License for more
# details.
#
# You should have received a copy of the GNU General Public License along with
# this program. If not, see .
# = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = =
# query sequence file: /home/ma745/minimalGenome/fastaFiles/MMSYN1/MMSYN1_0008.fasta
# searching against: /home/ma745/CAFA/pfam/pfamData/Pfam-A.hmm, with cut off --cut_ga
# resolve clan overlaps: on
# predict active sites: off
# = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = =
#
#
MMSYN1_0008 14 291 9 306 PF02653.14 BPD_transp_2 Family 6 256 268 105.7 2.1e-30 1 CL0142
###############################################################################################
############# Pfam MMSYN1_0008 FINISH
###############################################################################################
###############################################################################################
############# Pfam MMSYN1_0009 START
###############################################################################################
# pfam_scan.pl, run at Mon Feb 13 18:33:38 2017
#
# Copyright (c) 2009 Genome Research Ltd
# Freely distributed under the GNU
# General Public License
#
# Authors: Jaina Mistry (jaina@ebi.ac.uk),
# Rob Finn (rdf@ebi.ac.uk)
#
# This is free software; you can redistribute it and/or modify it under
# the terms of the GNU General Public License as published by the Free Software
# Foundation; either version 2 of the License, or (at your option) any later version.
# This program is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
# FOR A PARTICULAR PURPOSE. See the GNU General Public License for more
# details.
#
# You should have received a copy of the GNU General Public License along with
# this program. If not, see .
# = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = =
# query sequence file: /home/ma745/minimalGenome/fastaFiles/MMSYN1/MMSYN1_0009.fasta
# searching against: /home/ma745/CAFA/pfam/pfamData/Pfam-A.hmm, with cut off --cut_ga
# resolve clan overlaps: on
# predict active sites: off
# = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = =
#
#
MMSYN1_0009 74 350 71 351 PF02653.14 BPD_transp_2 Family 5 267 268 118.0 3.7e-34 1 CL0142
###############################################################################################
############# Pfam MMSYN1_0009 FINISH
###############################################################################################
###############################################################################################
############# Pfam MMSYN1_0010 START
###############################################################################################
# pfam_scan.pl, run at Mon Feb 13 18:31:25 2017
#
# Copyright (c) 2009 Genome Research Ltd
# Freely distributed under the GNU
# General Public License
#
# Authors: Jaina Mistry (jaina@ebi.ac.uk),
# Rob Finn (rdf@ebi.ac.uk)
#
# This is free software; you can redistribute it and/or modify it under
# the terms of the GNU General Public License as published by the Free Software
# Foundation; either version 2 of the License, or (at your option) any later version.
# This program is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
# FOR A PARTICULAR PURPOSE. See the GNU General Public License for more
# details.
#
# You should have received a copy of the GNU General Public License along with
# this program. If not, see .
# = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = =
# query sequence file: /home/ma745/minimalGenome/fastaFiles/MMSYN1/MMSYN1_0010.fasta
# searching against: /home/ma745/CAFA/pfam/pfamData/Pfam-A.hmm, with cut off --cut_ga
# resolve clan overlaps: on
# predict active sites: off
# = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = =
#
#
MMSYN1_0010 29 178 28 178 PF00005.25 ABC_tran Domain 2 137 137 102.6 2.2e-29 1 CL0023
MMSYN1_0010 286 442 285 443 PF00005.25 ABC_tran Domain 2 136 137 40.0 4.5e-10 1 CL0023
###############################################################################################
############# Pfam MMSYN1_0010 FINISH
###############################################################################################
###############################################################################################
############# Pfam MMSYN1_0011 START
###############################################################################################
# pfam_scan.pl, run at Mon Feb 13 18:32:56 2017
#
# Copyright (c) 2009 Genome Research Ltd
# Freely distributed under the GNU
# General Public License
#
# Authors: Jaina Mistry (jaina@ebi.ac.uk),
# Rob Finn (rdf@ebi.ac.uk)
#
# This is free software; you can redistribute it and/or modify it under
# the terms of the GNU General Public License as published by the Free Software
# Foundation; either version 2 of the License, or (at your option) any later version.
# This program is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
# FOR A PARTICULAR PURPOSE. See the GNU General Public License for more
# details.
#
# You should have received a copy of the GNU General Public License along with
# this program. If not, see .
# = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = =
# query sequence file: /home/ma745/minimalGenome/fastaFiles/MMSYN1/MMSYN1_0011.fasta
# searching against: /home/ma745/CAFA/pfam/pfamData/Pfam-A.hmm, with cut off --cut_ga
# resolve clan overlaps: on
# predict active sites: off
# = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = =
#
#
MMSYN1_0011 38 196 36 211 PF02608.12 Bmp Family 3 117 302 25.5 5.2e-06 1 CL0144
MMSYN1_0011 328 406 302 444 PF02608.12 Bmp Family 172 246 302 26.9 1.9e-06 1 CL0144
###############################################################################################
############# Pfam MMSYN1_0011 FINISH
###############################################################################################
###############################################################################################
############# Pfam MMSYN1_0012 START
###############################################################################################
# pfam_scan.pl, run at Mon Feb 13 18:32:48 2017
#
# Copyright (c) 2009 Genome Research Ltd
# Freely distributed under the GNU
# General Public License
#
# Authors: Jaina Mistry (jaina@ebi.ac.uk),
# Rob Finn (rdf@ebi.ac.uk)
#
# This is free software; you can redistribute it and/or modify it under
# the terms of the GNU General Public License as published by the Free Software
# Foundation; either version 2 of the License, or (at your option) any later version.
# This program is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
# FOR A PARTICULAR PURPOSE. See the GNU General Public License for more
# details.
#
# You should have received a copy of the GNU General Public License along with
# this program. If not, see .
# = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = =
# query sequence file: /home/ma745/minimalGenome/fastaFiles/MMSYN1/MMSYN1_0012.fasta
# searching against: /home/ma745/CAFA/pfam/pfamData/Pfam-A.hmm, with cut off --cut_ga
# resolve clan overlaps: on
# predict active sites: off
# = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = =
#
#
MMSYN1_0012 3 138 1 144 PF00133.20 tRNA-synt_1 Family 23 177 602 54.6 5e-15 1 CL0039
MMSYN1_0012 142 363 141 364 PF09334.9 tRNA-synt_1g Family 166 390 391 229.2 6.4e-68 1 CL0039
###############################################################################################
############# Pfam MMSYN1_0012 FINISH
###############################################################################################
###############################################################################################
############# Pfam MMSYN1_0025 START
###############################################################################################
# pfam_scan.pl, run at Mon Feb 13 18:32:08 2017
#
# Copyright (c) 2009 Genome Research Ltd
# Freely distributed under the GNU
# General Public License
#
# Authors: Jaina Mistry (jaina@ebi.ac.uk),
# Rob Finn (rdf@ebi.ac.uk)
#
# This is free software; you can redistribute it and/or modify it under
# the terms of the GNU General Public License as published by the Free Software
# Foundation; either version 2 of the License, or (at your option) any later version.
# This program is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
# FOR A PARTICULAR PURPOSE. See the GNU General Public License for more
# details.
#
# You should have received a copy of the GNU General Public License along with
# this program. If not, see .
# = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = =
# query sequence file: /home/ma745/minimalGenome/fastaFiles/MMSYN1/MMSYN1_0025.fasta
# searching against: /home/ma745/CAFA/pfam/pfamData/Pfam-A.hmm, with cut off --cut_ga
# resolve clan overlaps: on
# predict active sites: off
# = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = =
#
#
MMSYN1_0025 20 70 19 70 PF01084.18 Ribosomal_S18 Family 2 52 52 93.6 5.4e-27 1 No_clan
###############################################################################################
############# Pfam MMSYN1_0025 FINISH
###############################################################################################
###############################################################################################
############# Pfam MMSYN1_0026 START
###############################################################################################
# pfam_scan.pl, run at Mon Feb 13 18:33:13 2017
#
# Copyright (c) 2009 Genome Research Ltd
# Freely distributed under the GNU
# General Public License
#
# Authors: Jaina Mistry (jaina@ebi.ac.uk),
# Rob Finn (rdf@ebi.ac.uk)
#
# This is free software; you can redistribute it and/or modify it under
# the terms of the GNU General Public License as published by the Free Software
# Foundation; either version 2 of the License, or (at your option) any later version.
# This program is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
# FOR A PARTICULAR PURPOSE. See the GNU General Public License for more
# details.
#
# You should have received a copy of the GNU General Public License along with
# this program. If not, see .
# = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = =
# query sequence file: /home/ma745/minimalGenome/fastaFiles/MMSYN1/MMSYN1_0026.fasta
# searching against: /home/ma745/CAFA/pfam/pfamData/Pfam-A.hmm, with cut off --cut_ga
# resolve clan overlaps: on
# predict active sites: off
# = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = =
#
#
MMSYN1_0026 1 99 1 99 PF00436.23 SSB Domain 1 104 104 88.7 2e-25 1 CL0021
###############################################################################################
############# Pfam MMSYN1_0026 FINISH
###############################################################################################
###############################################################################################
############# Pfam MMSYN1_0027 START
###############################################################################################
# pfam_scan.pl, run at Mon Feb 13 18:30:45 2017
#
# Copyright (c) 2009 Genome Research Ltd
# Freely distributed under the GNU
# General Public License
#
# Authors: Jaina Mistry (jaina@ebi.ac.uk),
# Rob Finn (rdf@ebi.ac.uk)
#
# This is free software; you can redistribute it and/or modify it under
# the terms of the GNU General Public License as published by the Free Software
# Foundation; either version 2 of the License, or (at your option) any later version.
# This program is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
# FOR A PARTICULAR PURPOSE. See the GNU General Public License for more
# details.
#
# You should have received a copy of the GNU General Public License along with
# this program. If not, see .
# = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = =
# query sequence file: /home/ma745/minimalGenome/fastaFiles/MMSYN1/MMSYN1_0027.fasta
# searching against: /home/ma745/CAFA/pfam/pfamData/Pfam-A.hmm, with cut off --cut_ga
# resolve clan overlaps: on
# predict active sites: off
# = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = =
#
#
MMSYN1_0027 4 89 4 90 PF01250.15 Ribosomal_S6 Domain 1 89 90 68.5 4e-19 1 No_clan
###############################################################################################
############# Pfam MMSYN1_0027 FINISH
###############################################################################################
###############################################################################################
############# Pfam MMSYN1_0029 START
###############################################################################################
# pfam_scan.pl, run at Mon Feb 13 18:31:57 2017
#
# Copyright (c) 2009 Genome Research Ltd
# Freely distributed under the GNU
# General Public License
#
# Authors: Jaina Mistry (jaina@ebi.ac.uk),
# Rob Finn (rdf@ebi.ac.uk)
#
# This is free software; you can redistribute it and/or modify it under
# the terms of the GNU General Public License as published by the Free Software
# Foundation; either version 2 of the License, or (at your option) any later version.
# This program is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
# FOR A PARTICULAR PURPOSE. See the GNU General Public License for more
# details.
#
# You should have received a copy of the GNU General Public License along with
# this program. If not, see .
# = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = =
# query sequence file: /home/ma745/minimalGenome/fastaFiles/MMSYN1/MMSYN1_0029.fasta
# searching against: /home/ma745/CAFA/pfam/pfamData/Pfam-A.hmm, with cut off --cut_ga
# resolve clan overlaps: on
# predict active sites: off
# = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = =
#
#
MMSYN1_0029 3 173 2 193 PF02525.15 Flavodoxin_2 Domain 2 180 198 95.8 2.4e-27 1 CL0042
###############################################################################################
############# Pfam MMSYN1_0029 FINISH
###############################################################################################
###############################################################################################
############# Pfam MMSYN1_0030 START
###############################################################################################
# pfam_scan.pl, run at Mon Feb 13 18:31:53 2017
#
# Copyright (c) 2009 Genome Research Ltd
# Freely distributed under the GNU
# General Public License
#
# Authors: Jaina Mistry (jaina@ebi.ac.uk),
# Rob Finn (rdf@ebi.ac.uk)
#
# This is free software; you can redistribute it and/or modify it under
# the terms of the GNU General Public License as published by the Free Software
# Foundation; either version 2 of the License, or (at your option) any later version.
# This program is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
# FOR A PARTICULAR PURPOSE. See the GNU General Public License for more
# details.
#
# You should have received a copy of the GNU General Public License along with
# this program. If not, see .
# = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = =
# query sequence file: /home/ma745/minimalGenome/fastaFiles/MMSYN1/MMSYN1_0030.fasta
# searching against: /home/ma745/CAFA/pfam/pfamData/Pfam-A.hmm, with cut off --cut_ga
# resolve clan overlaps: on
# predict active sites: off
# = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = =
#
#