############################################################################################################### ############# TrSSP Functional class: Unknown START ############################################################################################################### MMSYN1_0138 272632.MSC_0147 0 1321.2 bactNOG[38] 06JDX@bactNOG,0Y9R5@NOG,1CAKE@tenNOG 06JDX|4.0713747922e-315|1049.25402832 S NA MMSYN1_0433 272632.MSC_0493 5.4e-145 475.9 CUTC bactNOG[38] 06N3A@bactNOG,COG3142@NOG 06N3A|2.91726033756e-60|206.646759033 P copper homeostasis protein cutc MMSYN1_0250 272632.MSC_0293 5.9e-135 435.6 bactNOG[38] 06ZFD@bactNOG,0YVMX@NOG,1CAVA@tenNOG 06ZFD|2.80067823479e-104|350.679626465 S NA MMSYN1_0696 272632.MSC_0770 2.7e-152 493.3 bactNOG[38] 06WCU@bactNOG,0YR44@NOG,1CASJ@tenNOG 06WCU|2.19361853009e-118|397.379455566 S RDD family MMSYN1_0389 272632.MSC_0449 0 1511 bactNOG[38] 05XNS@bactNOG,10046@NOG,1CAG8@tenNOG 05XNS|7.2911050967e-126|424.631713867 S Domain of unknown function(DUF2779) MMSYN1_0516 272632.MSC_0582 2.8e-278 910.5 bactNOG[38] 06TMJ@bactNOG,0YM4W@NOG,1CAQZ@tenNOG 06TMJ|1.33404949519e-220|735.67980957 S NA MMSYN1_0317 880447.MSB_A0614 2.4e-46 146 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 bactNOG[38] 0853A@bactNOG,1CAI5@tenNOG,COG3763@NOG 0853A|7.80500458879e-32|111.793563843 S UPF0154 protein MMSYN1_0531 272632.MSC_0598 0 3149.4 bactNOG[38] 06PKQ@bactNOG,0YFJ3@NOG,1CAMJ@tenNOG 06PKQ|0.0|2615.66430664 V FtsX-like permease family MMSYN1_0827 272632.MSC_0946 1.5e-299 980.8 bactNOG[38] 06VYK@bactNOG,0YQIK@NOG,1CARV@tenNOG 06VYK|2.86212316869e-243|810.90057373 S NA MMSYN1_0500 272632.MSC_0561 1.2e-56 177.1 GO:0005575,GO:0016020 bactNOG[38] 087JC@bactNOG,1CAI4@tenNOG,COG2868@NOG 087JC|1.10494145504e-35|124.81993103 J Protein of unknown function (DUF464) MMSYN1_0143 272632.MSC_0152 0 1014.7 bactNOG[38] 06TSM@bactNOG,0YMCH@NOG,1CAQR@tenNOG 06TSM|2.0853426909e-247|824.809020996 S NA MMSYN1_0286 743965.MPUT_0581 1e-35 110.8 bactNOG[38] 0745B@bactNOG,0Z1U4@NOG,1CAYM@tenNOG 0745B|4.79856868622e-35|124.358383179 S NA MMSYN1_0439 272632.MSC_0499 0 1383.3 bactNOG[38] 06QAR@bactNOG,0YH73@NOG,1CAPR@tenNOG 06QAR|0.0|1068.00366211 S NA MMSYN1_0730 272632.MSC_0826 2.4e-103 336.7 bactNOG[38] 08H1Y@bactNOG,0ZTDK@NOG 08H1Y|6.33665182719e-58|198.547912598 S NA MMSYN1_0164 272632.MSC_0179 8.2e-102 325.7 bactNOG[38] 075PU@bactNOG,0Z334@NOG,1CAYW@tenNOG 075PU|1.62946163391e-79|268.329742432 S NA MMSYN1_0440 272632.MSC_0500 0 1825.3 bactNOG[38] 06QGG@bactNOG,0YGHI@NOG,1CAPU@tenNOG 06QGG|0.0|1401.41125488 S NA MMSYN1_0298 272632.MSC_0350 3.2e-63 198.2 bactNOG[38] 086TF@bactNOG,1CAUD@tenNOG,COG1358@NOG 086TF|1.04077510769e-47|163.106887817 J Ribosomal protein L7Ae/L30e/S12e/Gadd45 family MMSYN1_0376 272632.MSC_0438 2.4e-58 183.3 bactNOG[38] 06YAU@bactNOG,0YU0R@NOG,1CAU0@tenNOG 06YAU|7.93242475559e-52|177.02545166 S NA MMSYN1_0239 743965.MPUT_0197 7.9e-96 309.1 bactNOG[38] 0712X@bactNOG,0YY3Y@NOG,1CAUZ@tenNOG 0712X|3.73461686848e-79|269.465911865 S NA MMSYN1_0375 743965.MPUT_0355 3.3e-48 153.8 bactNOG[38] 05P47@bactNOG,11UTC@NOG,1CAUU@tenNOG 05P47|1.66399703177e-39|138.7315979 S Protein of unknown function (DUF3196) MMSYN1_0326 880447.MSB_A0611 1.2e-129 418.7 bactNOG[38] 071FI@bactNOG,0YYNN@NOG,1CAUF@tenNOG 071FI|1.07255386405e-92|312.794311523 S NA MMSYN1_0299 272632.MSC_0351 8.7e-58 180.6 bactNOG[38] 0878M@bactNOG,1CAJ6@tenNOG,COG2740@NOG 0878M|3.4293293403e-43|148.915023804 K Protein of unknown function (DUF448) MMSYN1_0530 272632.MSC_0597 1.3e-125 404.7 bactNOG[38] 07A6D@bactNOG,0Z71Z@NOG,1CAVV@tenNOG 07A6D|8.98004966385e-99|332.151916504 S NA MMSYN1_0398 272632.MSC_0456 0 1597.4 bactNOG[38] 078Z9@bactNOG,0Z5VD@NOG,1CAXQ@tenNOG 078Z9|0.0|1253.8392334 S NA MMSYN1_0873 272632.MSC_0913 1.1e-44 136.8 bactNOG[38] 07KTX@bactNOG,0Z5ZE@NOG,1CAWJ@tenNOG 07KTX|3.46682920425e-43|148.315917969 S Bacterial protein of unknown function (DUF951) MMSYN1_0424 880447.MSB_A0499 1.2e-67 214.1 bactNOG[38] 07CB8@bactNOG,0Z9C5@NOG,1CAZ1@tenNOG 07CB8|1.88223687374e-52|180.246078491 S NA MMSYN1_0332 272632.MSC_0389 3.8e-171 555.9 bactNOG[38] 06TF7@bactNOG,0YKW5@NOG,1CAR2@tenNOG 06TF7|4.99046827063e-149|498.162231445 S NA MMSYN1_0373 272632.MSC_0436 1.2e-303 995.4 bactNOG[38] 06KV9@bactNOG,0YBS2@NOG,1CANY@tenNOG 06KV9|1.53159487429e-256|855.21295166 S NA MMSYN1_0281 272632.MSC_0326 4.8e-152 492 bactNOG[38] 06SQE@bactNOG,0YJV5@NOG,1CARJ@tenNOG 06SQE|7.77155271187e-118|394.847503662 S NA MMSYN1_0411 880447.MSB_A0513 1.6e-296 974 bactNOG[38] 08U0C@bactNOG,1CANS@tenNOG,COG1284@NOG 08U0C|5.69723206752e-119|400.118041992 S abc transporter permease protein MMSYN1_0346 743965.MPUT_0399 2.5e-38 119.1 bactNOG[38] 07524@bactNOG,0Z2JE@NOG,1CAXC@tenNOG 07524|4.30272885259e-31|111.294799805 S NA MMSYN1_0421 272632.MSC_0482 4.4e-65 204.2 bactNOG[38] 06YA8@bactNOG,0YU02@NOG,1CAU2@tenNOG 06YA8|5.96660946151e-55|186.653686523 S Pfam:DUF322 MMSYN1_0302 265311.Mfl289 2.2e-42 139.9 RDXA bactNOG[38] 08RCM@bactNOG,COG0778@NOG 08RCM|1.5906906619e-38|135.565139771 C Nitroreductase MMSYN1_0392 880447.MSB_A0533 8.9e-51 158 bactNOG[38] 076G9@bactNOG,0ZC51@NOG,1CAX9@tenNOG 076G9|1.71885094735e-39|137.111679077 S NA MMSYN1_0296 272632.MSC_0348 1.1e-135 438.1 bactNOG[38] 072HN@bactNOG,0Z08A@NOG,1CAV9@tenNOG 072HN|5.58861944114e-105|352.53112793 S NA MMSYN1_0388 880447.MSB_A0537 1.8e-125 403.6 bactNOG[38] 06S4B@bactNOG,0YIZS@NOG,1CAQM@tenNOG 06S4B|3.15029297276e-116|388.902648926 S NA ############################################################################################################### ############# TrSSP Functional class: Unknown FINISH ############################################################################################################### ############################################################################################################### ############# TrSSP Functional class: Generic START ############################################################################################################### MMSYN1_0838 272632.MSC_0960 6.7e-153 503.3 RLMB map00340,map00350,map00624,map01120 bactNOG[38] 05C2N@bactNOG,1CADN@tenNOG,COG0566@NOG 05C2N|2.03160147073e-68|234.526947021 J RNA methyltransferase TrmH family group 3 MMSYN1_0408 272632.MSC_0467 1.8e-142 467 TRMK GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 bactNOG[38] 08V39@bactNOG,1CAHF@tenNOG,COG2384@NOG 08V39|1.54186470249e-59|204.36428833 S SAM-dependent methyltransferase MMSYN1_0444 880447.MSB_A0479 0 1180.5 PEPO GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 map04614,map04640,map04974,map05010 bactNOG[38] 05C9K@bactNOG,1CAMB@tenNOG,COG3590@NOG 05C9K|5.16307641689e-195|653.175964355 O Endothelin-converting enzyme 1 MMSYN1_0345 272632.MSC_0405 1.6e-166 541.2 bactNOG[38] 06J85@bactNOG,0Y9H5@NOG,1CAMR@tenNOG 06J85|9.76413761003e-155|517.305419922 S NA MMSYN1_0030 272632.MSC_0030 7.3e-222 726.1 bactNOG[38] 05CQU@bactNOG,1CAA3@tenNOG,COG1136@NOG 1CAA3|3.30018869046e-139|468.084442139 V abc transporter atp-binding protein MMSYN1_0327 272632.MSC_0385 3.1e-169 552.5 SCPA GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 bactNOG[38] 07QII@bactNOG,1CAJB@tenNOG,COG1354@NOG 07QII|1.83592567341e-65|223.777511597 S Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves (By similarity) MMSYN1_0601 272632.MSC_0671 7.8e-196 637.5 bactNOG[38] 06V0G@bactNOG,0YP5N@NOG,1CARR@tenNOG 06V0G|2.59991590238e-163|545.520874023 S NA MMSYN1_0063 272632.MSC_0068 2.2e-213 695.3 DUSB GO:0002943,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0010565,GO:0016070,GO:0016491,GO:0016627,GO:0017150,GO:0019216,GO:0019217,GO:0019222,GO:0031323,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044710,GO:0046483,GO:0050789,GO:0050794,GO:0055114,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:1901360 bactNOG[38] 05CEH@bactNOG,1CA99@tenNOG,COG0042@NOG 1CA99|3.29450052643e-196|653.59197998 J Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs (By similarity) MMSYN1_0879 743965.MPUT_0591 8.2e-154 504 MGTA bactNOG[38] 05C52@bactNOG,1CA85@tenNOG,COG0474@NOG 1CA85|1.22564010783e-213|714.567687988 P transport ATPase MMSYN1_0437 880447.MSB_A0486 3.3e-210 691.2 bactNOG[38] 05EQI@bactNOG,1CABG@tenNOG,COG3481@NOG 05EQI|8.72131190853e-85|288.182189941 S Metal Dependent Phosphohydrolase MMSYN1_0054 272632.MSC_0053 9.5e-97 314 BCPB bactNOG[38] 08ZCG@bactNOG,COG1225@NOG 08ZCG|6.72291666957e-38|132.733932495 O alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen MMSYN1_0168 880447.MSB_A0215 0 1340.7 OPPF GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 map02010 bactNOG[38] 05C3U@bactNOG,1CABN@tenNOG,COG4608@NOG 1CABN|1.05290707484e-151|488.816223145 V abc transporter atp-binding protein MMSYN1_0352 272632.MSC_0411 5.8e-76 242.3 bactNOG[38] 06ZG0@bactNOG,0YVNV@NOG,1CAV2@tenNOG 06ZG0|4.38867296015e-73|247.929794312 S NA MMSYN1_0430 272632.MSC_0490 3.4e-66 208.7 bactNOG[38] 086C6@bactNOG,1CAIJ@tenNOG,COG2739@NOG 086C6|2.61679056366e-49|168.79234314 K Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein (By similarity) MMSYN1_0350 272632.MSC_0410 3.5e-55 173.6 HUPA bactNOG[38] 0837N@bactNOG,1CAJI@tenNOG,COG0776@NOG 0837N|5.16185666141e-32|114.334472656 L dNA-binding protein MMSYN1_0692 272632.MSC_0766 1.7e-193 632.1 RLUC bactNOG[38] 084IF@bactNOG,1CAF3@tenNOG,COG0564@NOG 084IF|2.52035169821e-103|348.18359375 J pseudouridine synthase MMSYN1_0906 880447.MSB_A0927 4.7e-154 501 LICA bactNOG[38] 068SD@bactNOG,1CAPD@tenNOG,COG0510@NOG 068SD|9.2121176088e-103|345.904876709 M PTS system, lichenan-specific IIA component MMSYN1_0728 880447.MSB_A0782 1.1e-184 603.3 bactNOG[38] 05HST@bactNOG,1CAJD@tenNOG,COG0561@NOG 05HST|7.59211373868e-63|216.300567627 H hydrolase MMSYN1_0431 272632.MSC_0491 3.7e-169 555.4 YMDB bactNOG[38] 05D48@bactNOG,1CAD0@tenNOG,COG1692@NOG 05D48|2.91396401701e-94|318.00680542 S metallophosphoesterase MMSYN1_0165 880447.MSB_A0212 1e-270 887.6 OPPB GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 map02010 bactNOG[38] 082QK@bactNOG,1CADT@tenNOG,COG0601@NOG 082QK|1.84587619739e-104|352.30166626 E ABC transporter (Permease MMSYN1_0109 880447.MSB_A0101 4.8e-193 635.3 NFO map03410 bactNOG[38] 05EFU@bactNOG,1CAA7@tenNOG,COG0648@NOG 05EFU|4.94537172868e-98|330.672821045 L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin (By similarity) MMSYN1_0693 272632.MSC_0767 9.4e-194 631.1 bactNOG[38] 067UA@bactNOG,0XUJM@NOG,1CAJR@tenNOG 1CAJR|1.78088111097e-123|415.360290527 S CAAX amino terminal protease family MMSYN1_0283 272632.MSC_0328 8.8e-134 435.9 RNHA map03030 bactNOG[38] 08Z2I@bactNOG,1CAQJ@tenNOG,COG3341@NOG 08Z2I|5.61830242988e-88|299.117126465 S ribonuclease MMSYN1_0805 880447.MSB_A0117 2.7e-191 622.8 bactNOG[38] 06XT9@bactNOG,0YT9J@NOG,1CAT5@tenNOG 06XT9|1.45204381777e-160|537.327453613 S NA MMSYN1_0139 272632.MSC_0148 1e-206 674.5 MGPA2 bactNOG[38] 07XI1@bactNOG,1CAEY@tenNOG,COG0618@NOG 07XI1|9.17602175329e-127|425.349945068 S DHH family MMSYN1_0493 272632.MSC_0554 0 1011.2 ARCT map00300,map00480,map01100,map01120,map01230 bactNOG[38] 07QSE@bactNOG,1CACY@tenNOG,COG0624@NOG 07QSE|2.23099825177e-123|415.588012695 E Dipeptidase MMSYN1_0870 272632.MSC_0916 0 1245.2 bactNOG[38] 08916@bactNOG,1CAMI@tenNOG,COG1288@NOG 08916|0.0|1126.81347656 S C4-dicarboxylate anaerobic carrier MMSYN1_0264 411467.BACCAP_01966 5.4e-45 148.9 PRKC GO:0002237,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005539,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009607,GO:0009617,GO:0009719,GO:0009847,GO:0009987,GO:0010033,GO:0010243,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0023052,GO:0032494,GO:0032502,GO:0036211,GO:0042221,GO:0042834,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0044699,GO:0044700,GO:0044763,GO:0050789,GO:0050794,GO:0050896,GO:0051704,GO:0051707,GO:0051716,GO:0065007,GO:0070887,GO:0071216,GO:0071219,GO:0071224,GO:0071310,GO:0071417,GO:0071495,GO:0071704,GO:0071944,GO:0097367,GO:1901698,GO:1901699,GO:1901700,GO:1901701 bactNOG[38] 05D9P@bactNOG,0EP0E@cloNOG,0ND8P@firmNOG,COG0515@NOG 0ND8P|8.79639190016e-76|258.680664062 T serine threonine protein kinase MMSYN1_0314 743965.MPUT_0058 4e-44 139.2 bactNOG[38] 07HEI@bactNOG,0ZKXQ@NOG,1CAS3@tenNOG 07HEI|1.47700373193e-46|161.861541748 S Pfam:DUF1393 MMSYN1_0505 272632.MSC_0575 2.3e-208 679.1 bactNOG[38] 072RJ@bactNOG,0Z0JH@NOG,1CATA@tenNOG 072RJ|4.93949656086e-166|554.973022461 S NA MMSYN1_0639 272632.MSC_0714 0 2953.6 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 bactNOG[38] 05NZ9@bactNOG,11U52@NOG,1CAE5@tenNOG 05NZ9|9.39520261718e-254|828.741455078 V abc transporter permease protein MMSYN1_0169 880447.MSB_A0216 0 2237.1 map02010 bactNOG[38] 07GWB@bactNOG,0YH4J@NOG,1CAPI@tenNOG 07GWB|0.0|1720.86999512 E Oligopeptide abc transporter MMSYN1_0504 272632.MSC_0564 3.7e-178 581.7 RSMI GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 bactNOG[38] 07SPE@bactNOG,1CAE0@tenNOG,COG0313@NOG 07SPE|2.48945789363e-97|328.240386963 S Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA (By similarity) MMSYN1_0382 265311.Mfl547 3.9e-37 123.2 DGK map00230,map00240,map01100 bactNOG[38] 05ZMH@bactNOG,1CAGV@tenNOG,COG1428@NOG 05ZMH|1.9277266271e-28|102.58052063 F deoxynucleoside kinase MMSYN1_0145 272632.MSC_0154 1.9e-196 639.1 bactNOG[38] 089E4@bactNOG,0ZKPV@NOG,1CAR4@tenNOG 089E4|2.07492164518e-169|565.313476562 S NA MMSYN1_0371 272632.MSC_0434 0 1262.8 PEAH GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006152,GO:0006163,GO:0006195,GO:0006200,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006869,GO:0008150,GO:0008152,GO:0009056,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009125,GO:0009126,GO:0009128,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009150,GO:0009154,GO:0009158,GO:0009161,GO:0009164,GO:0009166,GO:0009167,GO:0009169,GO:0009199,GO:0009203,GO:0009205,GO:0009207,GO:0009259,GO:0009261,GO:0009987,GO:0010876,GO:0015399,GO:0015405,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016820,GO:0016887,GO:0017111,GO:0019439,GO:0019637,GO:0019693,GO:0022804,GO:0022857,GO:0022892,GO:0031224,GO:0033036,GO:0034040,GO:0034641,GO:0034655,GO:0042278,GO:0042454,GO:0042623,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044425,GO:0044464,GO:0044699,GO:0044710,GO:0044763,GO:0044765,GO:0046034,GO:0046128,GO:0046130,GO:0046434,GO:0046483,GO:0046700,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071702,GO:0071704,GO:0071944,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901657,GO:1901658 map02010 bactNOG[38] 05BZ1@bactNOG,1CA91@tenNOG,COG1132@NOG 1CA91|1.08649832266e-201|674.317443848 V ABC transporter MMSYN1_0640 272632.MSC_0715 1.3e-164 542.2 TRUA bactNOG[38] 05DI7@bactNOG,1CAD2@tenNOG,COG0101@NOG 05DI7|2.94925203387e-56|194.349533081 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs (By similarity) MMSYN1_0167 880447.MSB_A0214 0 1229.2 OPPD GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 map02010 bactNOG[38] 05C3U@bactNOG,1CA8C@tenNOG,COG0444@NOG 1CA8C|4.42572655157e-175|586.629699707 E oligopeptide abc transporter atp-binding protein MMSYN1_0495 272632.MSC_0556 3.8e-187 609.2 bactNOG[38] 08PST@bactNOG,1CB0V@tenNOG,COG1940@NOG 08PST|2.79438520567e-98|332.050201416 G, K ROK family MMSYN1_0409 272632.MSC_0468 1.6e-163 532.7 bactNOG[38] 07Y1M@bactNOG,1CAFP@tenNOG,COG0327@NOG 07Y1M|1.4095620312e-85|289.808898926 S NIF3 (NGG1p interacting factor 3) MMSYN1_0401 880447.MSB_A0523 1.8e-288 945.2 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 map02010 bactNOG[38] 05BZ1@bactNOG,1CAZQ@tenNOG,COG1132@NOG 1CAZQ|2.06782626203e-232|776.045043945 V Peptidase C39 family MMSYN1_0197 428126.CLOSPI_01070 3.2e-131 432.4 POTA GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 map02010 bactNOG[38] 05C53@bactNOG,0I6PW@eryNOG,0NDIN@firmNOG,COG3842@NOG 0NDIN|8.07595348311e-163|546.237365723 E Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system (By similarity) MMSYN1_0029 272632.MSC_0029 4.8e-131 424.4 AZOR bactNOG[38] 0834W@bactNOG,1CADX@tenNOG,COG1182@NOG 0834W|6.79704003433e-81|273.431976318 I Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity (By similarity) MMSYN1_0166 272632.MSC_0181 2.3e-219 715.5 GO:0005575,GO:0016020 map02010 bactNOG[38] 07SI6@bactNOG,1CB1H@tenNOG,COG1173@NOG 07SI6|1.66857825419e-146|490.468719482 E transport system permease protein MMSYN1_0196 880447.MSB_A0243 1.2e-210 688.9 POTB GO:0005575,GO:0016020 map02010 bactNOG[38] 084AR@bactNOG,1CAD6@tenNOG,COG1176@NOG 084AR|1.38998547958e-95|322.543579102 E spermidine putrescine ABC transporter (Permease MMSYN1_0305 272632.MSC_0357 2.1e-245 809.4 PEPQ GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0016020,GO:0044424,GO:0044464,GO:0071944 map00310,map00780,map01100 bactNOG[38] 05DC7@bactNOG,1CAA6@tenNOG,COG0006@NOG 05DC7|8.95550749493e-118|396.550598145 E peptidase M24 MMSYN1_0410 272632.MSC_0469 7.3e-292 957.6 CSHB map03018 bactNOG[38] 05C1J@bactNOG,1CA97@tenNOG,COG0513@NOG 1CA97|5.30631091122e-179|598.534729004 L RNA helicase MMSYN1_0697 272632.MSC_0771 1.5e-208 679.4 bactNOG[38] 0894F@bactNOG,100CV@NOG,1CAPW@tenNOG 0894F|6.76118208474e-155|517.854858398 M glycosyltransferase MMSYN1_0438 880447.MSB_A0485 3.9e-88 285.1 HIT bactNOG[38] 07Z60@bactNOG,1CAFK@tenNOG,COG0537@NOG 07Z60|4.76508671023e-38|133.884292603 F, G histidine triad (HIT) protein MMSYN1_0043 428126.CLOSPI_02393 8.1e-75 246.2 YABB map00340,map00350,map00624,map01120 bactNOG[38] 060K3@bactNOG,0I7MP@eryNOG,0NFN3@firmNOG,COG4123@NOG 060K3|3.85117040586e-79|268.239532471 L Methyltransferase MMSYN1_0034 743965.MPUT_0553 0 1885.1 bactNOG[38] 07G3D@bactNOG,11HRK@NOG,1CAZM@tenNOG 07G3D|0.0|1825.62255859 V FtsX-like permease family MMSYN1_0876 272632.MSC_0908 8.8e-145 470.5 bactNOG[38] 07GNF@bactNOG,1CAZK@tenNOG,COG0531@NOG 07GNF|1.02195913148e-136|459.547027588 E Inherit from COG: amino acid MMSYN1_0127 272632.MSC_0132 4.6e-264 870.2 YWFO bactNOG[38] 05DCI@bactNOG,1CAB9@tenNOG,COG1078@NOG 05DCI|1.11942611411e-106|360.87512207 S Phosphohydrolase MMSYN1_0039 272632.MSC_0039 0 1393 FTSH GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 bactNOG[38] 05C3H@bactNOG,1CA8M@tenNOG,COG0465@NOG 1CA8M|9.96764468879e-274|907.735961914 O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (By similarity) MMSYN1_0817 880447.MSB_A0820 8.2e-182 593.4 bactNOG[38] 084SY@bactNOG,1CAFZ@tenNOG,COG1481@NOG 084SY|3.47551579926e-92|311.800720215 K May be required for sporulation (By similarity) MMSYN1_0710 272632.MSC_0805 6.3e-185 607.4 bactNOG[38] 08K4B@bactNOG,1CAHY@tenNOG,COG0561@NOG 08K4B|6.56454541696e-58|199.594223022 S hydrolase MMSYN1_0620 272632.MSC_0691 2.6e-101 323.6 bactNOG[38] 07HEQ@bactNOG,0YN08@NOG,1CASP@tenNOG 07HEQ|4.99214477689e-84|282.522644043 K Ferric uptake regulator family MMSYN1_0822 880447.MSB_A0815 1.6e-127 411.8 bactNOG[38] 07HEI@bactNOG,0ZKXQ@NOG,1CAS3@tenNOG 07HEI|5.77452966957e-99|333.416442871 S Pfam:DUF1393 MMSYN1_0132 880447.MSB_A0185 3.3e-217 710.4 bactNOG[38] 07R4W@bactNOG,1CAND@tenNOG,COG0464@NOG 07R4W|1.37507566328e-147|494.437896729 O AAA family MMSYN1_0400 272632.MSC_0458 4.3e-120 392.2 THIJ GO:0003674,GO:0003824,GO:0006457,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0018130,GO:0019438,GO:0019538,GO:0022613,GO:0033554,GO:0034599,GO:0034641,GO:0042026,GO:0042221,GO:0042254,GO:0042364,GO:0042723,GO:0042724,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044699,GO:0044710,GO:0044711,GO:0044763,GO:0046483,GO:0050896,GO:0051716,GO:0070887,GO:0071704,GO:0071840,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 map05012 bactNOG[38] 07S0N@bactNOG,1CAHM@tenNOG,COG0693@NOG 07S0N|3.65185689611e-54|186.763626099 T DJ-1 family MMSYN1_0615 272632.MSC_0688 2.6e-130 421.2 bactNOG[38] 0837Q@bactNOG,1CAEJ@tenNOG,COG0073@NOG 0837Q|6.69252305655e-86|289.532409668 J TRNA binding domain protein MMSYN1_0877 272632.MSC_0909 7.1e-139 448.7 bactNOG[38] 07A40@bactNOG,0ZG76@NOG,1CAY4@tenNOG 07A40|2.91062184851e-110|370.390960693 S NA MMSYN1_0372 880447.MSB_A0555 0 1268.2 bactNOG[38] 05BZ1@bactNOG,1CAKT@tenNOG,COG1132@NOG 1CAKT|0.0|1241.60107422 V ABC transporter MMSYN1_0907 880447.MSB_A0928 4.9e-171 555.5 bactNOG[38] 05SIP@bactNOG,1CAPT@tenNOG,COG0561@NOG 05SIP|8.4893073788e-122|408.539825439 S Hydrolase MMSYN1_0447 272632.MSC_0507 7.9e-106 343.3 DUT bactNOG[38] 05N0J@bactNOG,1CAIY@tenNOG,COG4508@NOG 05N0J|2.21615513011e-47|164.254623413 S dUTPase MMSYN1_0451 272632.MSC_0509 0 1025.5 GAPN map00010,map00250,map00280,map00350,map00410,map00562,map00640,map00650,map01100,map01120 bactNOG[38] 05C26@bactNOG,1CA96@tenNOG,COG1012@NOG 1CA96|1.86087733758e-175|586.997924805 C dehydrogenase MMSYN1_0133 880447.MSB_A0186 0 1454.9 bactNOG[38] 07D30@bactNOG,1CAKI@tenNOG,COG1404@NOG 07D30|4.74020502978e-209|699.157165527 O peptidase S8 and S53, subtilisin, kexin, sedolisin MMSYN1_0066 272632.MSC_0073 3.5e-192 625.1 bactNOG[38] 089CH@bactNOG,1CAQ5@tenNOG,COG0561@NOG 089CH|2.21199473147e-147|492.685455322 S Hydrolase MMSYN1_0691 272632.MSC_0765 0 1401.9 bactNOG[38] 07G89@bactNOG,0ZJI6@NOG,1CAKC@tenNOG 07G89|0.0|1139.0592041 S NA MMSYN1_0077 272632.MSC_0081 1.5e-182 600.9 bactNOG[38] 0667J@bactNOG,1CAMN@tenNOG,COG0561@NOG 0667J|1.99315524669e-54|188.051605225 S hydrolase MMSYN1_0399 272632.MSC_0457 0 3693.9 bactNOG[38] 07FZE@bactNOG,11HRK@NOG,1CAMG@tenNOG 07FZE|0.0|2479.27807617 V permease MMSYN1_0195 272632.MSC_0226 0 2108 POTC GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 map02010 bactNOG[38] 05D38@bactNOG,1CABZ@tenNOG,COG0687@NOG,COG1177@NOG 05D38|1.08414113051e-250|824.388671875 P putrescine abc transporter MMSYN1_0097 272632.MSC_0091 8.5e-194 638.7 map00230,map00240,map01100,map03030,map03410,map03420,map03440 bactNOG[38] 05C2M@bactNOG,1CAKP@tenNOG,COG0258@NOG 05C2M|1.74506754119e-82|281.095367432 L dna polymerase I MMSYN1_0881 272632.MSC_0903 1.7e-285 938.6 UHPT bactNOG[38] 05EKN@bactNOG,1CANJ@tenNOG,COG0477@NOG 05EKN|5.79887272226e-149|499.571075439 P Major Facilitator MMSYN1_0215 272632.MSC_0255 2.1e-88 286.8 RUVX GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 bactNOG[38] 07ZJC@bactNOG,1CAHJ@tenNOG,COG0816@NOG 07ZJC|4.72276938846e-36|127.271133423 L Could be a nuclease that resolves Holliday junction intermediates in genetic recombination (By similarity) MMSYN1_0325 272632.MSC_0383 5.3e-302 989.8 bactNOG[38] 06S3M@bactNOG,0YIYT@NOG,1CARK@tenNOG 06S3M|1.04659711573e-241|806.213928223 S NA MMSYN1_0836 272632.MSC_0958 1.7e-193 632.3 GATC bactNOG[38] 06C73@bactNOG,0Y3FC@NOG,1CAHQ@tenNOG 06C73|1.22749085765e-78|260.543701172 S amidotransferase suBunit MMSYN1_0878 272632.MSC_0908 0 1057.4 bactNOG[38] 07GNF@bactNOG,1CAZK@tenNOG,COG0531@NOG 07GNF|9.13460185742e-225|750.16027832 E Inherit from COG: amino acid MMSYN1_0420 272632.MSC_0481 0 1164.9 YLOV bactNOG[38] 05DP4@bactNOG,1CA94@tenNOG,COG1461@NOG 05DP4|4.4913687828e-162|544.295776367 S dak2 domain fusion protein ylov MMSYN1_0872 272632.MSC_0914 6.8e-237 781.5 YCHF GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0005488,GO:0005525,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006152,GO:0006163,GO:0006195,GO:0006200,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009125,GO:0009126,GO:0009128,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009150,GO:0009154,GO:0009158,GO:0009161,GO:0009164,GO:0009166,GO:0009167,GO:0009169,GO:0009199,GO:0009203,GO:0009205,GO:0009207,GO:0009259,GO:0009261,GO:0009987,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019001,GO:0019439,GO:0019637,GO:0019693,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034655,GO:0035639,GO:0036094,GO:0042278,GO:0042454,GO:0043021,GO:0043022,GO:0043023,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044464,GO:0044710,GO:0046034,GO:0046128,GO:0046130,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072523,GO:0097159,GO:1901135,GO:1901136,GO:1901265,GO:1901292,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901657,GO:1901658 bactNOG[38] 05C3G@bactNOG,1CA79@tenNOG,COG0012@NOG 05C3G|9.75112398702e-156|522.830200195 J gtp-binding protein ############################################################################################################### ############# TrSSP Functional class: Generic FINISH ############################################################################################################### ############################################################################################################### ############# TrSSP Functional class: Putative START ############################################################################################################### MMSYN1_0008 272632.MSC_0008 5.8e-202 660.2 RBSC-2 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 bactNOG[38] 080EB@bactNOG,1CACX@tenNOG,COG1079@NOG 080EB|4.65795562259e-111|373.594909668 G ABC transporter, permease MMSYN1_0010 272632.MSC_0010 0 1107.1 RBSA GO:0003674,GO:0005215,GO:0005351,GO:0005402,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006818,GO:0008150,GO:0008324,GO:0008643,GO:0009987,GO:0015075,GO:0015144,GO:0015291,GO:0015293,GO:0015294,GO:0015295,GO:0015672,GO:0015992,GO:0016020,GO:0022804,GO:0022857,GO:0022891,GO:0022892,GO:0034219,GO:0034220,GO:0044464,GO:0044699,GO:0044763,GO:0044765,GO:0051119,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:1901476 bactNOG[38] 08JQ9@bactNOG,1CB29@tenNOG,COG3845@NOG 08JQ9|6.14648780229e-208|694.762634277 S ABC transporter MMSYN1_0259 272632.MSC_0302 3.4e-173 563.7 PPNK GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 map00760,map01100 bactNOG[38] 07W91@bactNOG,1CAGU@tenNOG,COG0061@NOG 07W91|8.06745621639e-95|319.986022949 G Catalyzes the phosphorylation of NAD to NADP. Utilizes ATP and other nucleoside triphosphates as well as inorganic polyphosphate as a source of phosphorus (By similarity) MMSYN1_0154 272632.MSC_0163 4e-295 969.4 map00480,map01100 bactNOG[38] 05BZ6@bactNOG,1CA7U@tenNOG,COG0260@NOG 1CA7U|1.4498682008e-177|594.274108887 E aminopeptidase MMSYN1_0512 272632.MSC_0577 2e-205 672.2 PLSC map00561,map00564,map01100 bactNOG[38] 07RIS@bactNOG,1CAFF@tenNOG,COG0204@NOG 07RIS|9.7861066736e-106|355.484954834 I Acyl-transferase MMSYN1_0113 272632.MSC_0993 7.7e-270 885.8 bactNOG[38] 07T0H@bactNOG,COG1215@NOG 07T0H|8.86335154782e-142|475.64956665 M glycosyl transferase MMSYN1_0706 272632.MSC_0788 0 1190.5 bactNOG[38] 088KE@bactNOG,1CAHX@tenNOG,COG3639@NOG 088KE|2.58007637084e-198|663.176269531 P ABC transporter, permease MMSYN1_0609 272632.MSC_0681 7.3e-244 799.7 DNAB bactNOG[38] 08YAG@bactNOG,1CAT0@tenNOG,COG3611@NOG 08YAG|4.2044508373e-79|269.343475342 L replication initiation and membrane attachment MMSYN1_0707 272632.MSC_0789 3.6e-153 502.9 bactNOG[38] 05D5T@bactNOG,1CAEN@tenNOG,COG3638@NOG 05D5T|7.27252999779e-95|321.600524902 P phosphonate abc transporter MMSYN1_0518 272632.MSC_0584 1.9e-129 417.6 LSPA GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 map03060 bactNOG[38] 07HTS@bactNOG,0YQZG@NOG,1CARW@tenNOG 07HTS|6.12431233397e-110|368.329742432 U This protein specifically catalyzes the removal of signal peptides from prolipoproteins (By similarity) MMSYN1_0009 272632.MSC_0009 0 1748.6 RBSC-1 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 bactNOG[38] 083U2@bactNOG,1CAEK@tenNOG,COG4603@NOG 083U2|2.16714521912e-186|615.297851562 S ABC transporter, permease MMSYN1_0820 743965.MPUT_0101 3e-220 719.7 bactNOG[38] 088DY@bactNOG,1CAZN@tenNOG,COG0682@NOG 088DY|4.40360303386e-218|728.140808105 M Prolipoprotein diacylglyceryl transferase MMSYN1_0517 272632.MSC_0583 5.5e-201 662.5 RLUD GO:0000027,GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022607,GO:0022613,GO:0022618,GO:0031118,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042273,GO:0043170,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044699,GO:0044763,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:1901360 bactNOG[38] 05C34@bactNOG,1CA9Z@tenNOG,COG0564@NOG 05C34|2.01776429718e-127|429.922607422 J Pseudouridine synthase MMSYN1_0886 272632.MSC_1018 0 1074.1 bactNOG[38] 07SB6@bactNOG,1CAEQ@tenNOG,COG1823@NOG 07SB6|4.79663234519e-200|667.83996582 S sodium dicarboxylate symporter MMSYN1_0011 272632.MSC_0011 0 1167.5 XYLF bactNOG[38] 068S7@bactNOG,1CAHR@tenNOG,COG1744@NOG 068S7|1.60529773326e-120|405.416778564 S ABC transporter MMSYN1_0448 272632.MSC_0508 6.4e-162 532.2 SPOU bactNOG[38] 08RWN@bactNOG,1CADA@tenNOG,COG0566@NOG 08RWN|4.55296966683e-79|269.449737549 J rrna methyltransferase MMSYN1_0291 272632.MSC_0337 8.4e-113 365.2 RIBF map00740,map01100 bactNOG[38] 07WHP@bactNOG,1CAGS@tenNOG,COG0196@NOG 07WHP|3.24000302501e-45|157.522796631 H riboflavin MMSYN1_0686 272632.MSC_0760 9.2e-155 503.6 TRKA bactNOG[38] 0865Q@bactNOG,1CAIR@tenNOG,COG0569@NOG 0865Q|2.82842317861e-78|265.414916992 P Potassium uptake protein MMSYN1_0114 272632.MSC_0109 6.1e-191 620.7 bactNOG[38] 083SH@bactNOG,11TQE@NOG 083SH|4.91415637625e-102|338.008911133 M Glycosyl transferase family 2 MMSYN1_0617 272632.MSC_0690 8.9e-182 590.4 bactNOG[38] 088I3@bactNOG,0YAGC@NOG,1CAKQ@tenNOG 088I3|3.87308371643e-165|551.19921875 S Uncharacterised protein, DegV family COG1307 MMSYN1_0685 880447.MSB_A0733 0 1129.1 KTRB GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 bactNOG[38] 05CZN@bactNOG,1CABJ@tenNOG,COG0168@NOG 05CZN|1.19298819856e-138|466.857543945 P Potassium uptake protein MMSYN1_0708 880447.MSB_A0762 1e-280 921.6 P37 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 map02010 bactNOG[38] 06JMJ@bactNOG,0YA0E@NOG,1CANI@tenNOG 06JMJ|3.32002226738e-149|500.389068604 P ABC transporter substrate-binding MMSYN1_0301 272632.MSC_0353 1.6e-100 321.9 RIMP GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 bactNOG[38] 06CKM@bactNOG,0Z3YI@NOG,1CAJZ@tenNOG 06CKM|8.09597409194e-79|266.401367188 S Required for maturation of 30S ribosomal subunits (By similarity) MMSYN1_0214 272632.MSC_0254 9.4e-160 517.7 bactNOG[38] 07JZ7@bactNOG,126DV@NOG,1CAYF@tenNOG 07JZ7|4.7331821961e-134|448.951873779 S acidPPc MMSYN1_0732 880447.MSB_A0786 2.5e-142 467.4 DEOC GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 map00030 bactNOG[38] 05FCI@bactNOG,1CAB8@tenNOG,COG0274@NOG 05FCI|2.08166222882e-102|346.911651611 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate (By similarity) MMSYN1_0304 272632.MSC_0356 2.1e-212 695.7 CDSA GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 map00564,map01100,map04070 bactNOG[38] 07WZU@bactNOG,1CAGM@tenNOG,COG0575@NOG 07WZU|2.0809288038e-84|286.498504639 I Phosphatidate cytidylyltransferase MMSYN1_0494 272632.MSC_0555 9e-149 487.7 NANE map00520 bactNOG[38] 05C9S@bactNOG,COG3010@NOG 05C9S|6.53476351715e-98|331.711914062 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P) (By similarity) MMSYN1_0887 272632.MSC_1019 3.3e-291 960.4 bactNOG[38] 07QMW@bactNOG,1CABF@tenNOG,COG0446@NOG 07QMW|7.11446154093e-152|510.363891602 P pyridine nucleotide-disulfide oxidoreductase MMSYN1_0442 272632.MSC_0502 4.9e-85 273.9 NIFU bactNOG[38] 07ZBB@bactNOG,1CAGB@tenNOG,COG0822@NOG 07ZBB|1.32060689812e-41|144.586883545 C sUF system Fes assembly protein, NifU family MMSYN1_0441 272632.MSC_0501 1.2e-264 867.8 SUFS map00450,map00730,map01100 bactNOG[38] 05C9B@bactNOG,1CA9B@tenNOG,COG0520@NOG 1CA9B|9.44106757435e-153|511.87487793 E Nitrogen fixation protein MMSYN1_0799 272632.MSC_0894 3e-269 889.2 GLYA GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01230 bactNOG[38] 05C65@bactNOG,1CA7B@tenNOG,COG0112@NOG 05C65|3.2948612663e-212|709.882507324 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism (By similarity) MMSYN1_0818 880447.MSB_A0819 4.2e-285 939.2 bactNOG[38] 07TBN@bactNOG,1CAGZ@tenNOG,COG0682@NOG 07TBN|6.01934906431e-65|221.260360718 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins (By similarity) MMSYN1_0523 272632.MSC_0589 1.2e-192 627.9 bactNOG[38] 0752K@bactNOG,0Z2JX@NOG,1CAWF@tenNOG 0752K|4.63584698083e-168|562.274902344 S NA MMSYN1_0616 272632.MSC_0689 4.5e-179 584 bactNOG[38] 08589@bactNOG,1CAFB@tenNOG,COG1307@NOG 08589|2.34559634077e-95|322.083770752 S degv family ############################################################################################################### ############# TrSSP Functional class: Putative FINISH ############################################################################################################### ############################################################################################################### ############# TrSSP Functional class: Probable START ############################################################################################################### MMSYN1_0831 272632.MSC_0952 1.2e-230 755 PRS GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 map00030,map00230,map01100,map01110,map01120,map01230 bactNOG[38] 05C5T@bactNOG,1CA9H@tenNOG,COG0462@NOG 1CA9H|2.10901818148e-153|513.180358887 F Ribose-phosphate pyrophosphokinase MMSYN1_0253 272632.MSC_0296 6.8e-95 306.2 GREA bactNOG[38] 07YHV@bactNOG,1CAE1@tenNOG,COG0782@NOG 07YHV|1.16198096988e-55|190.72694397 K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides (By similarity) MMSYN1_0688 272632.MSC_0762 0 1054.6 GATA map00970,map01100 bactNOG[38] 07U77@bactNOG,1CA9D@tenNOG,COG0154@NOG 07U77|7.7762728312e-190|634.389465332 J amidotransferase subunit a MMSYN1_0425 272632.MSC_0485 3.8e-201 656 PSTS map02010,map02020,map05152 bactNOG[38] 06R2B@bactNOG,0YGZB@NOG,1CAQ7@tenNOG 06R2B|1.33155454809e-182|610.116149902 P phosphate abc transporter MMSYN1_0642 272632.MSC_0717 1.4e-198 648.9 ECFA2 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006152,GO:0006163,GO:0006195,GO:0006200,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0008150,GO:0008152,GO:0009056,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009125,GO:0009126,GO:0009128,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009150,GO:0009154,GO:0009158,GO:0009161,GO:0009164,GO:0009166,GO:0009167,GO:0009169,GO:0009199,GO:0009203,GO:0009205,GO:0009207,GO:0009259,GO:0009261,GO:0009987,GO:0015399,GO:0015405,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016820,GO:0016887,GO:0017111,GO:0019439,GO:0019637,GO:0019693,GO:0022804,GO:0022857,GO:0034641,GO:0034655,GO:0042278,GO:0042454,GO:0042623,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044464,GO:0044699,GO:0044710,GO:0044763,GO:0044765,GO:0046034,GO:0046128,GO:0046130,GO:0046434,GO:0046483,GO:0046700,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901657,GO:1901658 map02010 bactNOG[38] 08JJB@bactNOG,1CB25@tenNOG,COG1122@NOG 1CB25|1.45690366924e-123|414.762481689 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates (By similarity) MMSYN1_0826 880447.MSB_A0811 1.2e-189 616.6 map00230,map00240,map01100,map03030,map03430,map03440 bactNOG[38] 0894V@bactNOG,1CAZP@tenNOG,COG1466@NOG 0894V|1.17438699123e-143|481.253723145 L DNA polymerase III, delta subunit MMSYN1_0044 272632.MSC_0045 7.4e-152 494.1 HOLB map00230,map00240,map01100,map03030,map03430,map03440 bactNOG[38] 06AK1@bactNOG,1CAII@tenNOG,COG0470@NOG 06AK1|1.08590853906e-56|189.425582886 L DNA polymerase III subunit delta' MMSYN1_0694 272632.MSC_0768 3.8e-53 168.7 PTSH GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 bactNOG[38] 082BZ@bactNOG,1CAG7@tenNOG,COG1925@NOG 082BZ|3.50247464747e-32|113.02129364 G phosphocarrier protein (HPr) MMSYN1_0606 272632.MSC_0678 1.8e-262 866.4 PGK GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044424,GO:0044464,GO:0071944 map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01230 bactNOG[38] 05BZA@bactNOG,1CA7F@tenNOG,COG0126@NOG 05BZA|7.81897566229e-186|622.927185059 G Phosphoglycerate kinase MMSYN1_0445 272632.MSC_0505 2.3e-284 937.3 PGI GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 map00010,map00030,map00500,map00520,map01100,map01110,map01120 bactNOG[38] 07QYV@bactNOG,1CA6U@tenNOG,COG0166@NOG 07QYV|3.53194487464e-159|533.703063965 G phosphohexose isomerase MMSYN1_0240 272632.MSC_0280 5.9e-251 827.2 THII GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0044710,GO:0044711,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 map00730,map01100,map04122 bactNOG[38] 05D8I@bactNOG,1CA8F@tenNOG,COG0301@NOG 05D8I|1.07175009721e-133|448.976104736 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS (By similarity) MMSYN1_0344 272632.MSC_0404 7.5e-126 413.1 PPA GO:0000287,GO:0003674,GO:0003824,GO:0004427,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0009987,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0043167,GO:0043169,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0071944 map00190 bactNOG[38] 05F0N@bactNOG,1CAC5@tenNOG,COG0221@NOG 05F0N|8.05406327634e-62|211.338790894 C pyrophosphate phospho-hydrolase MMSYN1_0414 272632.MSC_0475 0 1636.8 RELA GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0008728,GO:0008893,GO:0009116,GO:0009117,GO:0009119,GO:0009150,GO:0009259,GO:0009267,GO:0009405,GO:0009605,GO:0009987,GO:0009991,GO:0015949,GO:0015968,GO:0015969,GO:0016020,GO:0016740,GO:0016772,GO:0016778,GO:0016787,GO:0016788,GO:0016794,GO:0019637,GO:0019693,GO:0030145,GO:0030312,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0033865,GO:0033875,GO:0034032,GO:0034035,GO:0034198,GO:0034641,GO:0042278,GO:0042578,GO:0042594,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044464,GO:0044699,GO:0044710,GO:0044763,GO:0046128,GO:0046483,GO:0046872,GO:0046914,GO:0050896,GO:0051704,GO:0051716,GO:0055086,GO:0071496,GO:0071704,GO:0071944,GO:0072521,GO:1901068,GO:1901135,GO:1901360,GO:1901564,GO:1901657 map00230 bactNOG[38] 05CWR@bactNOG,1CA9T@tenNOG,COG0317@NOG 05CWR|5.39121894328e-225|751.92199707 K, T In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance (By similarity) MMSYN1_0257 272632.MSC_0300 0 1262.1 RNJB GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 map03018 bactNOG[38] 05CN5@bactNOG,1CAAI@tenNOG,COG0595@NOG 05CN5|2.89661127382e-159|534.664550781 O Metallo-Beta-Lactamase MMSYN1_0329 880447.MSB_A0608 5.9e-155 504.2 RLUB GO:0008150,GO:0040007 bactNOG[38] 05FE9@bactNOG,1CACM@tenNOG,COG1187@NOG 1CACM|2.1013332582e-89|302.016296387 J Pseudouridine synthase MMSYN1_0733 272632.MSC_0829 0 1239.5 PGM GO:0003674,GO:0003824,GO:0004614,GO:0004615,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0008150,GO:0008152,GO:0009056,GO:0016020,GO:0016052,GO:0016853,GO:0016866,GO:0016868,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071944,GO:1901575 map00010,map00030,map00051,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120 bactNOG[38] 07QSU@bactNOG,1CA83@tenNOG,COG1109@NOG 07QSU|1.15776513023e-183|615.819030762 G Phosphoglucomutase phosphomannomutase alpha beta alpha domain MMSYN1_0823 880447.MSB_A0814 4e-217 717 FOLC map00790,map01100 bactNOG[38] 05DPM@bactNOG,1CADJ@tenNOG,COG0285@NOG 05DPM|4.63840159457e-79|269.711181641 H folylpolyglutamate synthase Dihydrofolate synthase MMSYN1_0908 272632.MSC_1066 3.3e-261 857 YIDC GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 map03060,map03070 bactNOG[38] 080C2@bactNOG,1CAF5@tenNOG,COG0706@NOG 080C2|1.73076995597e-107|362.464508057 U inner membrane protein translocase component YidC MMSYN1_0140 1033810.HLPCO_02230 1.1e-65 210.7 TDK GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 map00240,map00983,map01100 bactNOG[38] 07UGU@bactNOG,COG1435@NOG 07UGU|4.2539957633e-79|269.09197998 F thymidine kinase MMSYN1_0659 880447.MSB_A0702 1.6e-114 375.8 RPLE GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005623,GO:0005886,GO:0006412,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0019538,GO:0022613,GO:0034645,GO:0040007,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044464,GO:0071704,GO:0071840,GO:0071944,GO:1901576 map03010 bactNOG[38] 05CW6@bactNOG,1CAAZ@tenNOG,COG0094@NOG 05CW6|2.90696661993e-85|287.679290771 J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits MMSYN1_0608 272632.MSC_0680 9.7e-201 654.7 DNAC bactNOG[38] 08306@bactNOG,1CAEX@tenNOG,COG1484@NOG 08306|3.94267933146e-98|331.171264648 L dna replication protein MMSYN1_0807 880447.MSB_A0115 5.3e-101 325.9 RPLJ map03010 bactNOG[38] 07URM@bactNOG,1CAFE@tenNOG,COG0244@NOG 07URM|1.49428088016e-57|196.822952271 J 50S ribosomal protein l10 MMSYN1_0651 272632.MSC_0725 2.6e-140 461.6 ADK GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 map00230,map01100,map01110 bactNOG[38] 05CC8@bactNOG,1CAC4@tenNOG,COG0563@NOG 05CC8|1.27026357069e-70|241.61491394 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism (By similarity) MMSYN1_0545 272632.MSC_0613 0 1526.3 CLPB GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 bactNOG[38] 05C2Z@bactNOG,1CA63@tenNOG,COG0542@NOG 1CA63|0.0|1165.74316406 O Atp-dependent MMSYN1_0669 272632.MSC_0743 8.8e-59 190.2 RPLW GO:0003674,GO:0003735,GO:0005198,GO:0006412,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0071704,GO:1901576 map03010 bactNOG[38] 080UE@bactNOG,1CAF6@tenNOG,COG0089@NOG 080UE|2.73497843223e-38|134.862976074 J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome (By similarity) MMSYN1_0747 880447.MSB_A0907 1.9e-146 475.7 DEOD map00230,map00240,map00760,map01100,map01110 bactNOG[38] 07TH2@bactNOG,1CAA4@tenNOG,COG0813@NOG 07TH2|8.24402642839e-84|282.673339844 F purine nucleoside phosphorylase MMSYN1_0657 272632.MSC_0731 1e-80 264.2 RPSH GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0030529,GO:0032991,GO:0034645,GO:0040007,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901576 map03010 bactNOG[38] 08UJY@bactNOG,1CAD8@tenNOG,COG0096@NOG 08UJY|2.2449424476e-60|207.225234985 J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit (By similarity) MMSYN1_0227 880447.MSB_A0275 3.5e-276 906 PDHC map00010,map00020,map00280,map00620,map01100,map01110,map01120 bactNOG[38] 05C7S@bactNOG,1CA8A@tenNOG,COG0508@NOG 1CA8A|3.39689975677e-173|579.627990723 C Dihydrolipoamide acetyltransferase MMSYN1_0859 272632.MSC_0931 0 1366.1 TOPA GO:0000287,GO:0003674,GO:0003824,GO:0003916,GO:0003917,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006265,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016853,GO:0019219,GO:0019222,GO:0022616,GO:0030312,GO:0031323,GO:0032069,GO:0032074,GO:0034641,GO:0040007,GO:0043086,GO:0043167,GO:0043169,GO:0043170,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051336,GO:0051346,GO:0060255,GO:0060700,GO:0060701,GO:0065007,GO:0065009,GO:0071103,GO:0071704,GO:0071944,GO:0080090,GO:0090304,GO:1901360 bactNOG[38] 05C73@bactNOG,1CA68@tenNOG,COG0550@NOG 05C73|7.80376048496e-173|580.369689941 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone (By similarity) MMSYN1_0412 880447.MSB_A0512 0 2443.2 bactNOG[38] 088F4@bactNOG,0Y9K8@NOG,1CANW@tenNOG 088F4|0.0|2235.76782227 S NA MMSYN1_0234 272632.MSC_0274 1e-103 333.3 CRR GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 map00010,map00500,map00520,map02060 bactNOG[38] 05C5Y@bactNOG,1CASH@tenNOG,COG2190@NOG 1CASH|9.24324241201e-61|207.261138916 G pts system MMSYN1_0684 880447.MSB_A0732 2.4e-183 604.4 FOLD map00670,map00720,map01100,map01120 bactNOG[38] 05CN0@bactNOG,1CABQ@tenNOG,COG0190@NOG 05CN0|2.71553769499e-118|397.534393311 H Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate (By similarity) MMSYN1_0513 272632.MSC_0578 3.8e-68 216.8 ACPS GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 map00770 bactNOG[38] 068RJ@bactNOG,1CAJA@tenNOG,COG0736@NOG 068RJ|7.5396371745e-32|113.641082764 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein (By similarity) MMSYN1_0779 272632.MSC_0860 0 1428.8 bactNOG[38] 05CI1@bactNOG,1CAKJ@tenNOG,COG1263@NOG 05CI1|4.21491123618e-204|682.715576172 G PTS System MMSYN1_0796 272632.MSC_0891 2e-191 625.3 ATPB GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 map00190,map00195,map01100 bactNOG[38] 05W11@bactNOG,1CAF4@tenNOG,COG0356@NOG 05W11|7.17943453385e-95|320.391967773 C it plays a direct role in the translocation of protons across the membrane (By similarity) MMSYN1_0407 272632.MSC_0466 0 1075.1 RPOD map05111 bactNOG[38] 05DG1@bactNOG,1CA92@tenNOG,COG0568@NOG 1CA92|4.7032716386e-155|517.970825195 K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (By similarity) MMSYN1_0773 272632.MSC_0855 1.8e-233 766.6 NRDF GO:0003674,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005971,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009262,GO:0009263,GO:0009987,GO:0018130,GO:0019438,GO:0019637,GO:0030145,GO:0032991,GO:0034641,GO:0034654,GO:0043167,GO:0043169,GO:0043234,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0044710,GO:0046483,GO:0046872,GO:0046914,GO:0055086,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901576 map00230,map00240,map01100 bactNOG[38] 07R25@bactNOG,1CA6S@tenNOG,COG0208@NOG 07R25|2.58755920366e-136|456.937713623 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (By similarity) MMSYN1_0643 272632.MSC_0718 3.4e-260 853.2 ECFA1 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0016020,GO:0044464,GO:0051179,GO:0051234,GO:0071944 map02010 bactNOG[38] 08JJB@bactNOG,1CB26@tenNOG,COG1122@NOG 1CB26|9.46556892867e-137|458.016326904 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates (By similarity) MMSYN1_0233 272632.MSC_0273 0 1208.3 PTSI GO:0000287,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006810,GO:0008150,GO:0008152,GO:0008643,GO:0008965,GO:0008982,GO:0009401,GO:0009987,GO:0015144,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0019197,GO:0022804,GO:0022857,GO:0022891,GO:0022892,GO:0032991,GO:0034219,GO:0043167,GO:0043169,GO:0043234,GO:0044424,GO:0044444,GO:0044464,GO:0044699,GO:0044763,GO:0044765,GO:0046872,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:1901476 map00051,map01100,map02060 bactNOG[38] 05BZ3@bactNOG,1CA65@tenNOG,COG1080@NOG 05BZ3|6.62863819288e-228|762.47052002 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) (By similarity) MMSYN1_0026 272632.MSC_0026 6.3e-96 308.4 SSB map03030,map03430,map03440 bactNOG[38] 082AV@bactNOG,1CAIH@tenNOG,COG0629@NOG 082AV|2.4586254892e-44|153.982757568 L single-stranded DNA-binding protein MMSYN1_0637 272632.MSC_0712 5.1e-84 275.4 RPSI GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005623,GO:0005886,GO:0006412,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0019538,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044464,GO:0071704,GO:0071944,GO:1901576 map03010 bactNOG[38] 08UJD@bactNOG,1CAE7@tenNOG,COG0103@NOG 08UJD|3.28005197437e-59|203.541229248 J 30S ribosomal protein S9 MMSYN1_0105 272632.MSC_0100 2.8e-42 129.1 XSEB GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 map03430 bactNOG[38] 077YQ@bactNOG,0Z4YC@NOG,1CAXD@tenNOG 077YQ|1.18336304759e-39|137.050445557 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides (By similarity) MMSYN1_0789 272632.MSC_0884 3.2e-65 204.6 ATPC GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 map00190,map00195,map01100 bactNOG[38] 088CK@bactNOG,0YWCR@NOG,1CAUI@tenNOG 088CK|1.13033544677e-54|185.89302063 C ATP synthase MMSYN1_0543 272632.MSC_0611 3.5e-116 376 GRPE GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 bactNOG[38] 07ZRJ@bactNOG,1CAIX@tenNOG,COG0576@NOG 07ZRJ|1.1493354485e-51|178.823883057 O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ MMSYN1_0330 272632.MSC_0388 1.6e-133 437.3 DGK map00230,map00240,map01100 bactNOG[38] 05ZMH@bactNOG,1CAGV@tenNOG,COG1428@NOG 05ZMH|3.07368353159e-51|177.674835205 F deoxynucleoside kinase MMSYN1_0840 272632.MSC_0962 1.7e-139 452.7 NUSG bactNOG[38] 08545@bactNOG,1CAFU@tenNOG,COG0250@NOG 08545|3.23804218293e-65|217.292221069 K Participates in transcription elongation, termination and antitermination (By similarity) MMSYN1_0115 272632.MSC_0110 7.6e-186 606.3 bactNOG[38] 07XYG@bactNOG,1CAN6@tenNOG,COG1210@NOG 07XYG|1.41915741991e-118|398.252258301 M UTP-glucose-1-phosphate uridylyltransferase MMSYN1_0128 272632.MSC_0133 9e-89 283 map00230,map00240,map01100,map03020 bactNOG[38] 07A1R@bactNOG,0Z91U@NOG,1CAXA@tenNOG 07A1R|1.64677279124e-69|235.664215088 F Pfam:RNA_pol_delta MMSYN1_0612 272632.MSC_0684 0 2054.6 DNAE GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 map00230,map00240,map01100,map03030,map03430,map03440 bactNOG[38] 05C0B@bactNOG,1CA6Y@tenNOG,COG0587@NOG 1CA6Y|0.0|1103.10888672 L dna polymerase iii MMSYN1_0695 272632.MSC_0769 0 1521.1 PCRA map03420,map03430 bactNOG[38] 05C4R@bactNOG,1CA6X@tenNOG,COG0210@NOG 1CA6X|4.41926394234e-244|815.391296387 L ATP-dependent DNA helicase MMSYN1_0658 880447.MSB_A0701 1.5e-42 137.1 RPSZ map03010 bactNOG[38] 082QR@bactNOG,1CAFR@tenNOG,COG0199@NOG 082QR|3.42170570001e-32|113.247047424 J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site (By similarity) MMSYN1_0144 272632.MSC_0153 1.3e-101 323.9 bactNOG[38] 089QW@bactNOG,0YQI6@NOG,1CB0I@tenNOG 089QW|2.88464505798e-90|303.353393555 S Telomere recombination MMSYN1_0621 272632.MSC_0692 3.7e-45 138.4 bactNOG[38] 0738B@bactNOG,0XYB1@NOG,1CAW0@tenNOG 0738B|4.39163507356e-43|148.17741394 Q Carrier of the growing fatty acid chain in fatty acid biosynthesis (By similarity) MMSYN1_0790 272632.MSC_0885 0 1031.5 ATPD GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006152,GO:0006163,GO:0006164,GO:0006195,GO:0006200,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006818,GO:0008150,GO:0008152,GO:0008324,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009125,GO:0009126,GO:0009127,GO:0009128,GO:0009141,GO:0009142,GO:0009143,GO:0009144,GO:0009145,GO:0009146,GO:0009150,GO:0009152,GO:0009154,GO:0009156,GO:0009158,GO:0009161,GO:0009163,GO:0009164,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009169,GO:0009199,GO:0009201,GO:0009203,GO:0009205,GO:0009206,GO:0009207,GO:0009259,GO:0009260,GO:0009261,GO:0009579,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0015992,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016820,GO:0016887,GO:0017111,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022857,GO:0022890,GO:0022891,GO:0022892,GO:0030312,GO:0032991,GO:0033178,GO:0034220,GO:0034357,GO:0034641,GO:0034654,GO:0034655,GO:0040007,GO:0042278,GO:0042451,GO:0042454,GO:0042455,GO:0042623,GO:0042625,GO:0042626,GO:0042651,GO:0042716,GO:0042717,GO:0043234,GO:0043492,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044436,GO:0044444,GO:0044459,GO:0044464,GO:0044699,GO:0044710,GO:0044763,GO:0044765,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046128,GO:0046129,GO:0046130,GO:0046390,GO:0046434,GO:0046483,GO:0046700,GO:0046933,GO:0046961,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0072523,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901657,GO:1901658,GO:1901659 map00190,map00195,map01100 bactNOG[38] 05C4J@bactNOG,1CA6I@tenNOG,COG0055@NOG 05C4J|1.31249276954e-244|817.212158203 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits (By similarity) MMSYN1_0641 272632.MSC_0716 2e-216 712.4 ECFT GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 map02010 bactNOG[38] 05EK6@bactNOG,1CACA@tenNOG,COG0619@NOG 05EK6|3.56472346919e-98|330.988037109 P Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates (By similarity) MMSYN1_0515 272632.MSC_0581 7.2e-110 359.5 COMEB map00240,map01100 bactNOG[38] 08UK2@bactNOG,1CACG@tenNOG,COG2131@NOG 08UK2|6.66467051071e-47|163.15814209 F deaminase MMSYN1_0600 272632.MSC_0670 0 1329 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 map03018 bactNOG[38] 05CN5@bactNOG,1CA6M@tenNOG,COG0595@NOG 05CN5|1.13113402671e-237|793.849487305 O Metallo-Beta-Lactamase MMSYN1_0614 272632.MSC_0687 5.3e-231 757.2 PNCB map00760,map01100 bactNOG[38] 07RQP@bactNOG,1CA9E@tenNOG,COG1488@NOG 07RQP|1.59096645312e-136|458.00793457 H nicotinate phosphoribosyltransferase ############################################################################################################### ############# TrSSP Functional class: Probable FINISH ############################################################################################################### ############################################################################################################### ############# TrSSP Functional class: Equivalog START ############################################################################################################### MMSYN1_0260 272632.MSC_0303 0 1953.3 VALS GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0016876,GO:0019538,GO:0019752,GO:0030312,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0044710,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:1901360,GO:1901564,GO:1901576 map00970 bactNOG[38] 05CA4@bactNOG,1CA8J@tenNOG,COG0525@NOG 05CA4|0.0|1200.08166504 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner (By similarity) MMSYN1_0542 272632.MSC_0610 0 1238 DNAK map03018,map05152 bactNOG[38] 05CFG@bactNOG,1CA5E@tenNOG,COG0443@NOG 1CA5E|2.53689962447e-302|1006.7598877 O Acts as a chaperone (By similarity) MMSYN1_0003 880447.MSB_A0003 4.8e-110 359.3 RNMV GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 bactNOG[38] 05HVR@bactNOG,1CAGY@tenNOG,COG1658@NOG 05HVR|4.87915632357e-42|147.282119751 L Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step (By similarity) MMSYN1_0671 272632.MSC_0745 9.6e-145 476.3 RPLC GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0016020,GO:0019219,GO:0019222,GO:0019538,GO:0031323,GO:0031325,GO:0034645,GO:0040007,GO:0043170,GO:0044087,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0090069,GO:1901576,GO:2000232,GO:2000234 map03010 bactNOG[38] 05EEE@bactNOG,1CAB3@tenNOG,COG0087@NOG 05EEE|9.51388988858e-95|321.018280029 J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (By similarity) MMSYN1_0793 272632.MSC_0888 2.4e-106 342.8 ATPH GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 map00190,map00195,map01100 bactNOG[38] 06F7A@bactNOG,1CAJH@tenNOG,COG0712@NOG 06F7A|2.61248033339e-57|196.507141113 C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation (By similarity) MMSYN1_0806 272632.MSC_1007 3.1e-73 234.1 RPLL map03010 bactNOG[38] 082SK@bactNOG,1CAEB@tenNOG,COG0222@NOG 082SK|1.03786306463e-44|154.621932983 J Seems to be the binding site for several of the factors involved in protein synthesis and appears to be essential for accurate translation (By similarity) MMSYN1_0727 880447.MSB_A0781 5.4e-162 533.4 TPIA GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0005996,GO:0006006,GO:0006007,GO:0006091,GO:0006094,GO:0006096,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009987,GO:0016020,GO:0016051,GO:0016052,GO:0016853,GO:0016860,GO:0016861,GO:0019318,GO:0019319,GO:0019320,GO:0040007,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0044723,GO:0044724,GO:0046364,GO:0046365,GO:0071704,GO:0071944,GO:1901575,GO:1901576 map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01230 bactNOG[38] 05CP7@bactNOG,1CAB6@tenNOG,COG0149@NOG 05CP7|2.37859451234e-102|346.473144531 G Triose-phosphate isomerase MMSYN1_0690 272632.MSC_0764 0 1407.2 LIGA GO:0000287,GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006266,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0016874,GO:0016886,GO:0030312,GO:0033554,GO:0034641,GO:0034645,GO:0040007,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0044699,GO:0044763,GO:0046483,GO:0046872,GO:0050896,GO:0051716,GO:0071704,GO:0071944,GO:0090304,GO:1901360,GO:1901576 map03030,map03410,map03420,map03430 bactNOG[38] 05C77@bactNOG,1CA5P@tenNOG,COG0272@NOG 05C77|3.45784695323e-246|822.241455078 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA (By similarity) MMSYN1_0540 880447.MSB_A0385 4.9e-169 557.2 RPSB GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0019538,GO:0022626,GO:0022627,GO:0030312,GO:0030529,GO:0032991,GO:0034645,GO:0040007,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0071704,GO:0071944,GO:1901576 map03010 bactNOG[38] 05CE9@bactNOG,1CACS@tenNOG,COG0052@NOG 05CE9|5.00415934036e-103|347.597015381 J 30S ribosomal protein S2 MMSYN1_0221 880447.MSB_A0269 0 1045.4 PYK map00010,map00230,map00620,map00710,map01100,map01110,map01120,map01230,map04930,map05203 bactNOG[38] 05CA9@bactNOG,1CA8X@tenNOG,COG0469@NOG 05CA9|3.52821473683e-177|593.694824219 G Pyruvate kinase MMSYN1_0909 272632.MSC_1067 2.4e-65 207.2 RNPA bactNOG[38] 08AX8@bactNOG,1CAHI@tenNOG,COG0594@NOG 08AX8|6.52585495619e-35|122.288543701 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme (By similarity) MMSYN1_0814 272632.MSC_0984 5.1e-263 862.8 GLF bactNOG[38] 07R6R@bactNOG,COG0562@NOG 07R6R|2.48697549793e-140|470.68762207 M udp-galactopyranose mutase MMSYN1_0287 272632.MSC_0333 0 1246.5 ASPS GO:0003674,GO:0003824,GO:0004812,GO:0004815,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006422,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0016876,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0044710,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901576 map00970 bactNOG[38] 05C9M@bactNOG,1CA5F@tenNOG,COG0173@NOG 05C9M|7.71997823412e-249|831.246643066 J aspartyl-trna synthetase MMSYN1_0452 880447.MSB_A0470 0 1379.5 PARE GO:0003674,GO:0003824,GO:0003916,GO:0003918,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006152,GO:0006163,GO:0006195,GO:0006200,GO:0006259,GO:0006260,GO:0006261,GO:0006265,GO:0006276,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0008094,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009059,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009125,GO:0009126,GO:0009128,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009150,GO:0009154,GO:0009158,GO:0009161,GO:0009164,GO:0009166,GO:0009167,GO:0009169,GO:0009199,GO:0009203,GO:0009205,GO:0009207,GO:0009259,GO:0009261,GO:0009295,GO:0009340,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017111,GO:0019439,GO:0019637,GO:0019693,GO:0022402,GO:0030541,GO:0032991,GO:0034641,GO:0034645,GO:0034655,GO:0042278,GO:0042454,GO:0042623,GO:0043170,GO:0043234,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044270,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0044699,GO:0044710,GO:0044763,GO:0046034,GO:0046128,GO:0046130,GO:0046434,GO:0046483,GO:0046700,GO:0051276,GO:0055086,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0072521,GO:0072523,GO:0090304,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 bactNOG[38] 05C7D@bactNOG,1CA6T@tenNOG,COG0187@NOG 1CA6T|1.03829496246e-316|1054.18798828 L topoisomerase IV, subunit B MMSYN1_0150 272632.MSC_0159 0 1531.5 FUSA GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901576 bactNOG[38] 05CEJ@bactNOG,1CA6N@tenNOG,COG0480@NOG 1CA6N|0.0|1316.75976562 J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (By similarity) MMSYN1_0689 880447.MSB_A0737 6.8e-68 213.5 GATC map00970,map01100 bactNOG[38] 08CG5@bactNOG,0ZT5D@NOG,1CAX1@tenNOG 08CG5|8.08268063403e-54|182.989578247 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) (By similarity) MMSYN1_0646 272632.MSC_0722 1.8e-83 273.9 RPSK GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005623,GO:0005886,GO:0006412,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0019538,GO:0034645,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044464,GO:0071704,GO:0071944,GO:1901576 map03010 bactNOG[38] 08UHH@bactNOG,1CADB@tenNOG,COG0100@NOG 08UHH|2.52551745743e-59|202.501647949 J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome (By similarity) MMSYN1_0482 880447.MSB_A0446 3.4e-34 102 RPSU map03010 bactNOG[38] 06ZWI@bactNOG,0YWA0@NOG,1CAVN@tenNOG 06ZWI|2.19549418524e-39|136.061782837 J 30S ribosomal protein S21 MMSYN1_0046 880447.MSB_A0009 6.5e-114 374.6 RECR GO:0000731,GO:0005575,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009295,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044699,GO:0044763,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 map03440 bactNOG[38] 05F3K@bactNOG,1CAEG@tenNOG,COG0353@NOG 05F3K|1.25581427301e-63|218.567443848 L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO (By similarity) MMSYN1_0285 880447.MSB_A0335 0 1296.4 LEPA GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006152,GO:0006163,GO:0006184,GO:0006195,GO:0006412,GO:0006414,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006970,GO:0008135,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009059,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009150,GO:0009154,GO:0009164,GO:0009166,GO:0009199,GO:0009203,GO:0009205,GO:0009207,GO:0009259,GO:0009261,GO:0009266,GO:0009268,GO:0009409,GO:0009628,GO:0009651,GO:0009987,GO:0010467,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019439,GO:0019538,GO:0019637,GO:0019693,GO:0030312,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034645,GO:0034655,GO:0035639,GO:0036094,GO:0042278,GO:0042454,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044270,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0044710,GO:0046039,GO:0046128,GO:0046130,GO:0046434,GO:0046483,GO:0046700,GO:0050896,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072523,GO:0097159,GO:1901068,GO:1901069,GO:1901135,GO:1901136,GO:1901265,GO:1901292,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 map05134 bactNOG[38] 05C4S@bactNOG,1CA7A@tenNOG,COG0481@NOG 05C4S|1.05798044347e-292|974.756225586 M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner (By similarity) MMSYN1_0200 272632.MSC_0221 9.4e-116 380.3 INFC GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 bactNOG[38] 08UUX@bactNOG,1CAFQ@tenNOG,COG0290@NOG 08UUX|7.24375931947e-62|213.123184204 J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins (By similarity) MMSYN1_0413 272632.MSC_0474 1.3e-109 359.4 APT GO:0000287,GO:0003674,GO:0003824,GO:0003999,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006144,GO:0006166,GO:0006168,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009113,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0034641,GO:0034654,GO:0042278,GO:0042440,GO:0042451,GO:0042455,GO:0042802,GO:0043094,GO:0043096,GO:0043101,GO:0043167,GO:0043169,GO:0043174,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0044710,GO:0046083,GO:0046084,GO:0046112,GO:0046128,GO:0046129,GO:0046148,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 map00230,map01100 bactNOG[38] 09003@bactNOG,1CACD@tenNOG,COG0503@NOG 09003|1.62469386414e-64|219.74508667 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis (By similarity) MMSYN1_0422 880447.MSB_A0501 1.3e-40 126.2 RPMB map03010 bactNOG[38] 084QT@bactNOG,1CAI7@tenNOG,COG0227@NOG 084QT|4.50991743746e-33|115.890625 J 50S ribosomal protein L28 MMSYN1_0076 272632.MSC_0080 5e-302 996.7 ASNS GO:0003674,GO:0003824,GO:0004812,GO:0004816,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006421,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0016876,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044464,GO:0044710,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901576 map00970 bactNOG[38] 05C5S@bactNOG,1CA67@tenNOG,COG0017@NOG 05C5S|2.646501723e-173|580.738037109 J asparaginyl-tRNA synthetase MMSYN1_0837 272632.MSC_0959 3.3e-284 939.2 CYSS GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0016876,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0040007,GO:0043038,GO:0043039,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0044710,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901576 map00970 bactNOG[38] 05C8N@bactNOG,1CA8Y@tenNOG,COG0215@NOG 05C8N|1.16154638996e-151|510.173309326 J cysteinyl-tRNA synthetase MMSYN1_0875 272632.MSC_0911 4.5e-125 411.7 PGSA GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008444,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016772,GO:0016780,GO:0017169,GO:0019637,GO:0030312,GO:0031224,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044425,GO:0044464,GO:0044710,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0071944,GO:0090407,GO:1901576 map00564,map01100 bactNOG[38] 05BZQ@bactNOG,1CAFD@tenNOG,COG0558@NOG 05BZQ|4.7045978407e-64|220.105758667 I cdp-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase MMSYN1_0106 272632.MSC_0101 9e-296 976.9 XSEA GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008855,GO:0009056,GO:0009057,GO:0009318,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0019439,GO:0030312,GO:0032991,GO:0034641,GO:0034655,GO:0043170,GO:0043234,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:1901360,GO:1901361,GO:1901575 map03430 bactNOG[38] 05DVS@bactNOG,1CAAD@tenNOG,COG1570@NOG 05DVS|8.73603560477e-137|459.620056152 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides (By similarity) MMSYN1_0263 272632.MSC_0306 2.1e-191 630.9 RSGA GO:0003674,GO:0003824,GO:0003924,GO:0006139,GO:0006152,GO:0006163,GO:0006184,GO:0006195,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009150,GO:0009154,GO:0009164,GO:0009166,GO:0009199,GO:0009203,GO:0009205,GO:0009207,GO:0009259,GO:0009261,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0019439,GO:0019637,GO:0019693,GO:0022613,GO:0034641,GO:0034655,GO:0042254,GO:0042278,GO:0042454,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044710,GO:0046039,GO:0046128,GO:0046130,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0071840,GO:0072521,GO:0072523,GO:1901068,GO:1901069,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901657,GO:1901658 bactNOG[38] 05E06@bactNOG,1CAA1@tenNOG,COG1162@NOG 05E06|1.92976543882e-86|294.036987305 G May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover (By similarity) MMSYN1_0363 272632.MSC_0426 2e-82 262.9 RIMM GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 bactNOG[38] 08DA4@bactNOG,0Z0J3@NOG,1CAU1@tenNOG 08DA4|3.26165783369e-72|245.060317993 J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes (By similarity) MMSYN1_0218 596329.HMPREF0631_0541 1.2e-194 641.7 GLPK map00561,map01100,map03320,map04626 bactNOG[38] 08HMR@bactNOG,0F6W1@cloNOG,0P5Y9@firmNOG,COG0554@NOG 08HMR|1.31092900071e-224|748.989013672 C Key enzyme in the regulation of glycerol uptake and metabolism (By similarity) MMSYN1_0402 272632.MSC_0461 7.1e-108 350.9 YBEY GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 bactNOG[38] 080V7@bactNOG,1CAG0@tenNOG,COG0319@NOG 080V7|7.54291972696e-43|149.695419312 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA (By similarity) MMSYN1_0638 272632.MSC_0713 2.4e-99 325.4 RPLM GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0019538,GO:0030312,GO:0034645,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071944,GO:1901576 map03010 bactNOG[38] 08UM5@bactNOG,1CAC0@tenNOG,COG0102@NOG 08UM5|1.57401145926e-59|203.169754028 J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly (By similarity) MMSYN1_0787 272632.MSC_0868 0 2043.4 bactNOG[38] 05C52@bactNOG,1CA85@tenNOG,COG0474@NOG 1CA85|0.0|1355.40539551 P transport ATPase MMSYN1_0772 272632.MSC_0854 5e-105 342.1 NRDI GO:0000166,GO:0003674,GO:0005488,GO:0006464,GO:0008150,GO:0008152,GO:0009987,GO:0010181,GO:0019538,GO:0032553,GO:0036094,GO:0036211,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:1901265,GO:1901363 bactNOG[38] 05G3E@bactNOG,1CAAS@tenNOG,COG1780@NOG 05G3E|1.29932904703e-62|213.977539062 F Probably involved in ribonucleotide reductase function (By similarity) MMSYN1_0141 272632.MSC_0150 1.3e-232 767.2 PRFA GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016149,GO:0019538,GO:0022411,GO:0032984,GO:0034645,GO:0040007,GO:0043021,GO:0043022,GO:0043170,GO:0043241,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0044699,GO:0044763,GO:0071704,GO:0071822,GO:0071840,GO:0097159,GO:1901363,GO:1901576 bactNOG[38] 05C8K@bactNOG,1CA8B@tenNOG,COG0216@NOG 05C8K|1.47894145415e-150|503.919403076 J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA (By similarity) MMSYN1_0126 880447.MSB_A0178 0 1077.6 GLTX GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0016020,GO:0044424,GO:0044464,GO:0071944 map00860,map00970,map01100,map01110 bactNOG[38] 05C20@bactNOG,1CA75@tenNOG,COG0008@NOG 1CA75|5.80577501225e-219|730.708190918 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) (By similarity) MMSYN1_0142 272632.MSC_0151 1.2e-181 593.3 HEMK bactNOG[38] 0819C@bactNOG,1CAH3@tenNOG,COG2890@NOG 0819C|6.64815969792e-74|251.89604187 J Methyltransferase MMSYN1_0644 272632.MSC_0720 1.6e-77 253.4 RPLQ GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006412,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0019538,GO:0030312,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044464,GO:0071704,GO:0071944,GO:1901576 map03010 bactNOG[38] 08ZT0@bactNOG,1CAFY@tenNOG,COG0203@NOG 08ZT0|5.72250501111e-40|139.55682373 J 50S ribosomal protein l17 MMSYN1_0364 880447.MSB_A0565 2.7e-151 498.3 TRMD GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360 map00900,map01100,map01110 bactNOG[38] 05D6X@bactNOG,1CAAC@tenNOG,COG0336@NOG 05D6X|4.10737443587e-103|348.076599121 J Specifically methylates guanosine-37 in various tRNAs (By similarity) MMSYN1_0254 272632.MSC_0297 0 1255 UVRC GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009380,GO:0009381,GO:0009987,GO:0016020,GO:0016787,GO:0016788,GO:0030312,GO:0032991,GO:0033554,GO:0034641,GO:0040007,GO:0043170,GO:0043234,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0044699,GO:0044763,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:1901360 map03420 bactNOG[38] 05CII@bactNOG,1CA5G@tenNOG,COG0322@NOG 05CII|6.00676342428e-165|554.442443848 L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision (By similarity) MMSYN1_0202 272632.MSC_0219 9.9e-116 380.1 RSMD GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0008990,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0052913,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:1901360 map00340,map00350,map00624,map01120 bactNOG[38] 06H78@bactNOG,1CAIM@tenNOG,COG0742@NOG 06H78|1.30770212195e-44|155.809890747 L methyltransferase MMSYN1_0198 880447.MSB_A0245 5.3e-74 241.8 RPLT GO:0000027,GO:0000900,GO:0003674,GO:0003676,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006417,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0015934,GO:0016020,GO:0016043,GO:0017148,GO:0019222,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030371,GO:0030529,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034622,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044699,GO:0044763,GO:0045182,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051246,GO:0051248,GO:0060255,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0090079,GO:0097159,GO:1901363,GO:1901576,GO:2000112,GO:2000113 map03010 bactNOG[38] 08YZX@bactNOG,1CADD@tenNOG,COG0292@NOG 08YZX|3.2636257756e-59|204.041976929 J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (By similarity) MMSYN1_0792 272632.MSC_0887 0 1117.8 ATPA GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 map00190,map00195,map01100 bactNOG[38] 05CDG@bactNOG,1CA6W@tenNOG,COG0056@NOG 05CDG|3.09321657036e-250|834.916931152 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit (By similarity) MMSYN1_0199 272632.MSC_0222 1.6e-37 115.9 RPMI map03010 bactNOG[38] 086CC@bactNOG,1CAHV@tenNOG,COG0291@NOG 086CC|2.96092932257e-27|97.8295516968 J 50s ribosomal protein L35 MMSYN1_0541 272632.MSC_0609 1.2e-246 814 DNAJ GO:0003674,GO:0003756,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006457,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0016020,GO:0016853,GO:0016860,GO:0016862,GO:0016864,GO:0019538,GO:0034641,GO:0034645,GO:0042026,GO:0043167,GO:0043169,GO:0043170,GO:0043335,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0050896,GO:0051082,GO:0071704,GO:0090304,GO:1901360,GO:1901576 bactNOG[38] 05BZ5@bactNOG,1CA7S@tenNOG,COG0484@NOG 05BZ5|3.60023861486e-115|387.925354004 O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity) MMSYN1_0380 272632.MSC_0442 6.9e-222 725.1 NADD map00760,map01100 bactNOG[38] 08H0C@bactNOG,1CB1A@tenNOG,COG1057@NOG,COG1713@NOG 08H0C|1.59040553187e-150|504.136779785 H adenylyltransferase EC 2.7.7.18 MMSYN1_0874 880447.MSB_A0852 6.6e-138 453.6 RSMG GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 bactNOG[38] 05D28@bactNOG,1CADZ@tenNOG,COG0357@NOG 05D28|6.83474820521e-68|232.492080688 M Specifically methylates the N7 position of a guanine in 16S rRNA (By similarity) MMSYN1_0359 272632.MSC_0422 2.4e-295 975 RNY GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 bactNOG[38] 05E4Y@bactNOG,1CA8E@tenNOG,COG1418@NOG 05E4Y|4.26654798463e-160|536.692687988 S Endoribonuclease that initiates mRNA decay (By similarity) MMSYN1_0394 272632.MSC_0454 0 1694.7 LON GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 map04112 bactNOG[38] 05C6P@bactNOG,1CA6A@tenNOG,COG0466@NOG 1CA6A|1.65300490959e-313|1038.63806152 O ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner (By similarity) MMSYN1_0387 880447.MSB_A0538 4.1e-240 792.8 MNMA GO:0001510,GO:0002097,GO:0002098,GO:0002143,GO:0003674,GO:0003824,GO:0004808,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016782,GO:0016783,GO:0030488,GO:0032259,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360 map04122 bactNOG[38] 05CCJ@bactNOG,1CA8K@tenNOG,COG0482@NOG 05CCJ|1.52505899146e-157|528.919677734 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 (By similarity) MMSYN1_0810 272632.MSC_0994 6.4e-90 294.2 RPLK GO:0003674,GO:0003735,GO:0005198,GO:0006412,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0071704,GO:1901576 map03010 bactNOG[38] 08UIK@bactNOG,1CACP@tenNOG,COG0080@NOG 08UIK|3.03110012989e-60|207.365966797 J This protein binds directly to 23S ribosomal RNA (By similarity) MMSYN1_0652 272632.MSC_0726 0 1025 SECY GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005886,GO:0006810,GO:0006886,GO:0006950,GO:0006952,GO:0008104,GO:0008150,GO:0009306,GO:0009579,GO:0009607,GO:0009987,GO:0015031,GO:0016020,GO:0016021,GO:0020012,GO:0030682,GO:0031224,GO:0032940,GO:0033036,GO:0034357,GO:0034613,GO:0040007,GO:0042651,GO:0043952,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044425,GO:0044436,GO:0044464,GO:0044699,GO:0044763,GO:0044765,GO:0045184,GO:0046903,GO:0046907,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051701,GO:0051704,GO:0051707,GO:0051805,GO:0051807,GO:0051832,GO:0051834,GO:0052059,GO:0052173,GO:0052200,GO:0052385,GO:0052550,GO:0052564,GO:0052567,GO:0052572,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071806,GO:0071944,GO:0075136 map03060,map03070 bactNOG[38] 05CGG@bactNOG,1CA9I@tenNOG,COG0201@NOG 05CGG|8.81313386321e-139|466.743621826 U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently (By similarity) MMSYN1_0390 272632.MSC_0450 3e-204 673.6 FMT map00670,map00970 bactNOG[38] 05CAE@bactNOG,1CABB@tenNOG,COG0223@NOG 05CAE|7.6142256884e-107|361.42175293 J Modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by (I) promoting its recognition by IF2 and (II) impairing its binding to EFTu-GTP (By similarity) MMSYN1_0634 272632.MSC_0709 0 1798 LEUS GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0016876,GO:0019538,GO:0019752,GO:0030312,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044464,GO:0044710,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:1901360,GO:1901564,GO:1901576 map00970 bactNOG[38] 05C8T@bactNOG,1CA5J@tenNOG,COG0495@NOG 05C8T|0.0|1187.74377441 J Leucyl-tRNA synthetase MMSYN1_0672 272632.MSC_0746 7.4e-64 208.3 RPSJ GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0019538,GO:0022626,GO:0022627,GO:0030312,GO:0030529,GO:0032991,GO:0034645,GO:0040007,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:1901576 map03010 bactNOG[38] 08Z10@bactNOG,1CAGI@tenNOG,COG0051@NOG 08Z10|6.29586054152e-50|171.131454468 J Involved in the binding of tRNA to the ribosomes (By similarity) MMSYN1_0499 272632.MSC_0560 2.5e-60 197 RPMA GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006412,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0019538,GO:0030312,GO:0034645,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044464,GO:0071704,GO:0071944,GO:1901576 map03010 bactNOG[38] 05K46@bactNOG,1CAER@tenNOG,COG0211@NOG 05K46|1.55060393166e-44|156.042205811 J 50S ribosomal protein l27 MMSYN1_0798 272632.MSC_0893 4.4e-137 450.4 UPP map00240,map01100 bactNOG[38] 05CZ5@bactNOG,1CA9W@tenNOG,COG0035@NOG 05CZ5|1.51063837028e-104|353.188537598 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate (By similarity) MMSYN1_0308 272632.MSC_0358 1.8e-222 733.4 TRPS GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 map00970 bactNOG[38] 05C31@bactNOG,1CA8Z@tenNOG,COG0180@NOG 05C31|1.64949415153e-125|422.879943848 J Tryptophanyl-tRNA synthetase MMSYN1_0775 272632.MSC_0856 0 1472.1 RNR GO:0000154,GO:0000175,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008408,GO:0008997,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016072,GO:0016556,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0022613,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:1901360 map03018 bactNOG[38] 05C40@bactNOG,1CA84@tenNOG,COG0557@NOG 05C40|1.24117064791e-198|665.710144043 K 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs (By similarity) MMSYN1_0825 272632.MSC_0944 0 1445.4 UVRB GO:0002682,GO:0002684,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006950,GO:0008150,GO:0009607,GO:0016020,GO:0031347,GO:0035821,GO:0044003,GO:0044403,GO:0044419,GO:0044424,GO:0044464,GO:0048518,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050896,GO:0051409,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052255,GO:0052552,GO:0052553,GO:0052555,GO:0052556,GO:0052564,GO:0052572,GO:0065007,GO:0065008,GO:0071944,GO:0075136,GO:0080134 map03420 bactNOG[38] 05CCW@bactNOG,1CA6E@tenNOG,COG0556@NOG 05CCW|4.37971693257e-315|1050.53845215 L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage (By similarity) MMSYN1_0362 880447.MSB_A0567 6.7e-56 182.4 RPSP GO:0000028,GO:0003674,GO:0003676,GO:0003677,GO:0003735,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006412,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0016787,GO:0016788,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030529,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043566,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044699,GO:0044763,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0090304,GO:0090305,GO:0097159,GO:1901360,GO:1901363,GO:1901576 map03010 bactNOG[38] 05K5M@bactNOG,1CAFI@tenNOG,COG0228@NOG 05K5M|1.50966006219e-37|133.036651611 J 30s ribosomal protein S16 MMSYN1_0377 880447.MSB_A0550 2.4e-284 939.3 OBG GO:0000166,GO:0000287,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006152,GO:0006163,GO:0006184,GO:0006195,GO:0006464,GO:0006468,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007059,GO:0008150,GO:0008152,GO:0009056,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009150,GO:0009154,GO:0009164,GO:0009166,GO:0009199,GO:0009203,GO:0009205,GO:0009207,GO:0009259,GO:0009261,GO:0009987,GO:0016020,GO:0016043,GO:0016310,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0019439,GO:0019538,GO:0019637,GO:0019693,GO:0022607,GO:0022613,GO:0022618,GO:0030529,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032991,GO:0034622,GO:0034641,GO:0034655,GO:0035639,GO:0036094,GO:0036211,GO:0040007,GO:0042254,GO:0042255,GO:0042278,GO:0042454,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044267,GO:0044270,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0044699,GO:0044710,GO:0044763,GO:0046039,GO:0046128,GO:0046130,GO:0046434,GO:0046483,GO:0046700,GO:0046777,GO:0046872,GO:0055086,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0072521,GO:0072523,GO:0097159,GO:1901068,GO:1901069,GO:1901135,GO:1901136,GO:1901265,GO:1901292,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901657,GO:1901658 bactNOG[38] 05C9R@bactNOG,1CA7Q@tenNOG,COG0536@NOG 05C9R|1.03329870694e-148|499.477416992 C An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate (By similarity). It may play a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control MMSYN1_0832 272632.MSC_0954 3.8e-119 391.4 PTH GO:0003674,GO:0003824,GO:0004045,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008150,GO:0008152,GO:0016020,GO:0016787,GO:0016788,GO:0040007,GO:0044424,GO:0044464,GO:0052689,GO:0071944 bactNOG[38] 08ZPD@bactNOG,1CAD5@tenNOG,COG0193@NOG 08ZPD|4.56520619152e-67|229.744384766 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis (By similarity) MMSYN1_0839 743965.MPUT_0054 4.8e-33 100.7 map03060,map03070 bactNOG[38] 077G4@bactNOG,0Z4ID@NOG,1CAWW@tenNOG 077G4|1.25961946826e-30|108.795951843 U SecE/Sec61-gamma subunits of protein translocation complex MMSYN1_0809 272632.MSC_0995 9.4e-144 472.8 RPLA GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006417,GO:0006446,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0016020,GO:0017148,GO:0019222,GO:0019538,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0045947,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:1901576,GO:2000112,GO:2000113 map03010 bactNOG[38] 05C64@bactNOG,1CAB0@tenNOG,COG0081@NOG 05C64|8.8637804484e-102|342.249298096 J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release (By similarity) MMSYN1_0650 272632.MSC_0724 7.9e-173 569.6 MAP GO:0000096,GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006082,GO:0006464,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0009066,GO:0009987,GO:0010467,GO:0016020,GO:0016151,GO:0016485,GO:0016787,GO:0019538,GO:0019752,GO:0030145,GO:0035551,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044464,GO:0044710,GO:0046872,GO:0046914,GO:0050897,GO:0051604,GO:0070006,GO:0070011,GO:0070084,GO:0071704,GO:0071944,GO:1901564,GO:1901605 bactNOG[38] 05CA1@bactNOG,1CA9M@tenNOG,COG0024@NOG 05CA1|5.01869502832e-111|374.634368896 J Removes the N-terminal methionine from nascent proteins (By similarity) MMSYN1_0361 272632.MSC_0424 3e-86 278.1 RLMH GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 bactNOG[38] 082VF@bactNOG,1CAGK@tenNOG,COG1576@NOG 082VF|7.41270030651e-48|165.49420166 S Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA (By similarity) MMSYN1_0656 272632.MSC_0730 4e-114 374.8 RPLF GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006412,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0019538,GO:0030312,GO:0034645,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044464,GO:0071704,GO:0071944,GO:1901576 map03010 bactNOG[38] 08R5J@bactNOG,1CAB2@tenNOG,COG0097@NOG 08R5J|1.73740596472e-74|252.282913208 J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center (By similarity) MMSYN1_0435 880447.MSB_A0488 8.7e-206 677.2 MANA map00051,map00520,map01100,map01110 bactNOG[38] 05DG6@bactNOG,1CAPV@tenNOG,COG1482@NOG 05DG6|1.24555496863e-93|317.492767334 G mannose-6-phosphate isomerase MMSYN1_0270 272632.MSC_0311 7.7e-89 285.5 bactNOG[38] 083Q5@bactNOG,1CAI9@tenNOG,COG0802@NOG 083Q5|1.10814559594e-41|144.841461182 S ATPase, YjeE family MMSYN1_0791 272632.MSC_0886 1.6e-174 574.5 ATPG GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 map00190,map00195,map01100 bactNOG[38] 05J80@bactNOG,1CABV@tenNOG,COG0224@NOG 05J80|2.93913123424e-90|305.782318115 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex (By similarity) MMSYN1_0667 272632.MSC_0741 9.4e-59 191.8 RPSS GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005623,GO:0005886,GO:0006412,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0019538,GO:0034645,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044464,GO:0071704,GO:0071944,GO:1901576 map03010 bactNOG[38] 05K7S@bactNOG,1CADW@tenNOG,COG0185@NOG 05K7S|4.1688719504e-44|153.184356689 J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA (By similarity) MMSYN1_0288 272632.MSC_0334 2.3e-274 900.3 HISS GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 map00970 bactNOG[38] 07R36@bactNOG,1CA95@tenNOG,COG0124@NOG 07R36|1.27842504958e-153|514.670654297 J histidyl-tRNA synthetase MMSYN1_0729 272632.MSC_0825 0 1177.9 GPMI GO:0003674,GO:0003824,GO:0004619,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005996,GO:0006006,GO:0006007,GO:0006091,GO:0006096,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016052,GO:0016853,GO:0016866,GO:0016868,GO:0019318,GO:0019320,GO:0030145,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0044723,GO:0044724,GO:0046365,GO:0046537,GO:0046872,GO:0046914,GO:0071704,GO:1901575 map00010,map00260,map00680,map01100,map01110,map01120,map01230 bactNOG[38] 05CJI@bactNOG,1CA6R@tenNOG,COG0696@NOG 05CJI|5.49848373115e-197|659.351989746 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate (By similarity) MMSYN1_0040 272632.MSC_0042 1.2e-242 795.4 TILS GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 bactNOG[38] 07XRM@bactNOG,1CADE@tenNOG,COG0037@NOG 07XRM|3.05348496264e-98|322.363586426 D Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine (By similarity) MMSYN1_0415 272632.MSC_0476 0 2072.6 SMC GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0007059,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0044699,GO:0044763,GO:0071944 bactNOG[38] 05CDB@bactNOG,1CA8G@tenNOG,COG1196@NOG 05CDB|9.4842523044e-255|838.567871094 D Required for chromosome condensation and partitioning (By similarity) MMSYN1_0645 272632.MSC_0721 1.2e-202 667.9 RPOA GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030312,GO:0032774,GO:0034062,GO:0034641,GO:0034654,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:1901360,GO:1901362,GO:1901576 map00230,map00240,map01100,map03020 bactNOG[38] 05CTF@bactNOG,1CAAV@tenNOG,COG0202@NOG 05CTF|4.43260399005e-113|380.989837646 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity) MMSYN1_0654 272632.MSC_0728 1e-152 502.6 RPSE GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0019538,GO:0034645,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071944,GO:1901576 map03010 bactNOG[38] 08RA9@bactNOG,1CAC3@tenNOG,COG0098@NOG 08RA9|6.16821693341e-82|277.74887085 J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body (By similarity) MMSYN1_0163 272632.MSC_0178 0 1973.6 ALAS GO:0001071,GO:0001121,GO:0001130,GO:0001131,GO:0001141,GO:0001217,GO:0002161,GO:0003674,GO:0003700,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006351,GO:0006355,GO:0006399,GO:0006412,GO:0006417,GO:0006418,GO:0006419,GO:0006448,GO:0006450,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0016020,GO:0016070,GO:0016787,GO:0016788,GO:0016874,GO:0016875,GO:0016876,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0043038,GO:0043039,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0044710,GO:0045892,GO:0045934,GO:0046483,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051252,GO:0051253,GO:0052689,GO:0060255,GO:0065007,GO:0065008,GO:0071704,GO:0080090,GO:0090304,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:2000112,GO:2000113,GO:2001141 map00970 bactNOG[38] 05CIM@bactNOG,1CA7P@tenNOG,COG0013@NOG 05CIM|1.13137820965e-283|946.593566895 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (By similarity) MMSYN1_0885 272632.MSC_1017 0 1386.2 bactNOG[38] 05CWE@bactNOG,1CA6J@tenNOG,COG0445@NOG 05CWE|4.47859102955e-270|900.382324219 D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 (By similarity) MMSYN1_0429 272632.MSC_0489 4.4e-239 789.3 FTSY GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006152,GO:0006163,GO:0006184,GO:0006195,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009150,GO:0009154,GO:0009164,GO:0009166,GO:0009199,GO:0009203,GO:0009205,GO:0009207,GO:0009259,GO:0009261,GO:0009987,GO:0015031,GO:0016020,GO:0016462,GO:0016482,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019439,GO:0019637,GO:0019693,GO:0030312,GO:0031224,GO:0031226,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0033036,GO:0033365,GO:0034613,GO:0034641,GO:0034655,GO:0035639,GO:0036094,GO:0042278,GO:0042454,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0044699,GO:0044710,GO:0044763,GO:0044765,GO:0045047,GO:0045184,GO:0046039,GO:0046128,GO:0046130,GO:0046434,GO:0046483,GO:0046700,GO:0046903,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055086,GO:0070727,GO:0070972,GO:0071702,GO:0071704,GO:0071944,GO:0072521,GO:0072523,GO:0072594,GO:0072599,GO:0097159,GO:1901068,GO:1901069,GO:1901135,GO:1901136,GO:1901265,GO:1901292,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901657,GO:1901658 map03060,map03070 bactNOG[38] 05CCP@bactNOG,1CA62@tenNOG,COG0552@NOG 05CCP|3.72278909776e-125|422.378723145 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) MMSYN1_0771 585198.HMPREF0574_1298 5.4e-257 846.7 NRDA map00230,map00240,map01100 bactNOG[38] 07QYD@bactNOG,COG0209@NOG 07QYD|1.66027472488e-172|578.681396484 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (By similarity) MMSYN1_0117 272632.MSC_0112 2.2e-163 533.2 PLSY GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 map00561,map00564,map01100 bactNOG[38] 07Y8I@bactNOG,1CAG5@tenNOG,COG0344@NOG 07Y8I|6.1584462775e-77|260.720123291 S Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP (By similarity) MMSYN1_0666 880447.MSB_A0709 4.9e-69 225 RPLV GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005623,GO:0006412,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0030312,GO:0034645,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044464,GO:0071704,GO:0071944,GO:1901576 map03010 bactNOG[38] 05KAP@bactNOG,1CADV@tenNOG,COG0091@NOG 05KAP|2.04657264768e-54|188.175308228 J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome (By similarity) MMSYN1_0360 880447.MSB_A0569 1.5e-275 910.2 FFH GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006152,GO:0006163,GO:0006184,GO:0006195,GO:0006605,GO:0006612,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009150,GO:0009154,GO:0009164,GO:0009166,GO:0009199,GO:0009203,GO:0009205,GO:0009207,GO:0009259,GO:0009261,GO:0009987,GO:0015031,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019439,GO:0019637,GO:0019693,GO:0030312,GO:0030529,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032991,GO:0033036,GO:0034613,GO:0034641,GO:0034655,GO:0035639,GO:0036094,GO:0040007,GO:0042278,GO:0042454,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0044699,GO:0044710,GO:0044763,GO:0044765,GO:0045184,GO:0046039,GO:0046128,GO:0046130,GO:0046434,GO:0046483,GO:0046700,GO:0046903,GO:0046907,GO:0048500,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055086,GO:0070727,GO:0071702,GO:0071704,GO:0071944,GO:0072521,GO:0072523,GO:0097159,GO:1901068,GO:1901069,GO:1901135,GO:1901136,GO:1901265,GO:1901292,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901657,GO:1901658 map03060,map03070 bactNOG[38] 05CB9@bactNOG,1CA7I@tenNOG,COG0541@NOG 05CB9|1.18880068373e-172|578.793273926 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY MMSYN1_0611 272632.MSC_0683 0 1939.1 POLA map00230,map00240,map01100,map03030,map03410,map03420,map03440 bactNOG[38] 05C2M@bactNOG,1CA9C@tenNOG,COG0258@NOG,COG0749@NOG 05C2M|3.81832322373e-270|902.463623047 L dna polymerase I MMSYN1_0238 272632.MSC_0278 2.1e-133 438.3 RPSD map03010 bactNOG[38] 05G6W@bactNOG,1CAAP@tenNOG,COG0522@NOG 05G6W|7.26456124519e-78|264.013641357 J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit (By similarity) MMSYN1_0289 880447.MSB_A0339 5.1e-66 208.6 RBFA GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 bactNOG[38] 085JA@bactNOG,1CAH1@tenNOG,COG0858@NOG 085JA|3.77766717645e-43|149.030563354 J Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Essential for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA (By similarity) MMSYN1_0535 272632.MSC_0599 0 1195.9 ARGS GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 map00970 bactNOG[38] 07RUW@bactNOG,1CA77@tenNOG,COG0018@NOG 07RUW|4.14189943797e-209|698.636413574 J arginyl-trna synthetase MMSYN1_0418 279010.BL02317 7.1e-57 189.3 bactNOG[38] 04RYC@bacNOG,08ZBM@bactNOG,0NIEK@firmNOG,COG0571@NOG 08ZBM|4.84980962333e-71|242.603302002 K Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Also processes some mRNAs, and tRNAs when they are encoded in the rRNA operon (By similarity) MMSYN1_0607 272632.MSC_0679 8.2e-224 732.2 GAP GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 map00010,map01100,map01110,map01120,map01230,map04066,map05010 bactNOG[38] 05C17@bactNOG,1CA5Q@tenNOG,COG0057@NOG 1CA5Q|1.08656473618e-167|560.013122559 G dehydrogenase MMSYN1_0348 272632.MSC_0408 2.8e-263 869.4 DER GO:0000027,GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006152,GO:0006163,GO:0006184,GO:0006195,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009056,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009150,GO:0009154,GO:0009164,GO:0009166,GO:0009199,GO:0009203,GO:0009205,GO:0009207,GO:0009259,GO:0009261,GO:0009987,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019439,GO:0019637,GO:0019693,GO:0022607,GO:0022613,GO:0022618,GO:0030312,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034622,GO:0034641,GO:0034655,GO:0035639,GO:0036094,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0042278,GO:0042454,GO:0043021,GO:0043022,GO:0043167,GO:0043168,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0044699,GO:0044710,GO:0044763,GO:0046039,GO:0046128,GO:0046130,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0072521,GO:0072523,GO:0097159,GO:1901068,GO:1901069,GO:1901135,GO:1901136,GO:1901265,GO:1901292,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901657,GO:1901658 map00260,map00680,map01100,map01120,map01230 bactNOG[38] 05DKZ@bactNOG,1CA5M@tenNOG,COG1160@NOG 05DKZ|2.73567733422e-190|637.688659668 F GTPase that plays an essential role in the late steps of ribosome biogenesis (By similarity) MMSYN1_0220 880447.MSB_A0268 2.2e-215 704.9 PFKA GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01230 bactNOG[38] 07S9E@bactNOG,1CA81@tenNOG,COG0205@NOG 07S9E|8.14709140851e-136|456.412384033 G 6-phosphofructokinase (EC 2.7.1.11) MMSYN1_0262 272632.MSC_0305 9.1e-142 467.5 RPE map00030,map00040,map00710,map01100,map01110,map01120,map01230 bactNOG[38] 05DJV@bactNOG,1CAEI@tenNOG,COG0036@NOG 05DJV|3.19823464844e-76|259.029510498 G ribulose-phosphate 3-epimerase MMSYN1_0247 272632.MSC_0290 3.8e-126 414.3 ENGB GO:0000910,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0007049,GO:0008150,GO:0009987,GO:0022402,GO:0044424,GO:0044444,GO:0044464,GO:0044699,GO:0044763,GO:0051301 bactNOG[38] 05WHM@bactNOG,1CAED@tenNOG,COG0218@NOG 05WHM|1.6013809682e-71|244.006011963 S Necessary for normal cell division and for the maintenance of normal septation (By similarity) MMSYN1_0082 272632.MSC_0086 7e-48 149.1 RPST map03010 bactNOG[38] 08AXB@bactNOG,1CAJC@tenNOG,COG0268@NOG 08AXB|8.312701374e-32|112.610488892 J Binds directly to 16S ribosomal RNA (By similarity) MMSYN1_0834 272632.MSC_0956 3.3e-283 935.3 DNAB map03030,map04112 bactNOG[38] 05CDU@bactNOG,1CAA2@tenNOG,COG0305@NOG 05CDU|1.70527447946e-141|474.718688965 L Replicative dna helicase MMSYN1_0045 272632.MSC_0046 1.9e-133 438.4 TMK map00240,map01100 bactNOG[38] 08ZMD@bactNOG,1CADI@tenNOG,COG0125@NOG 08ZMD|2.05443235458e-77|264.200775146 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis (By similarity) MMSYN1_0649 272632.MSC_1100 1.6e-47 154.3 INFA GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006413,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901576 bactNOG[38] 05K9U@bactNOG,1CAFW@tenNOG,COG0361@NOG 05K9U|5.08825214787e-40|140.568145752 J however, it seems to stimulate more or less all the activities of the other two initiation factors, IF-2 and IF-3 (By similarity) MMSYN1_0660 880447.MSB_A0703 1.1e-68 219.1 RPLX map03010 bactNOG[38] 080DU@bactNOG,1CAHU@tenNOG,COG0198@NOG 080DU|6.17619534576e-34|119.368415833 J One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (By similarity) MMSYN1_0403 272632.MSC_0462 6.1e-191 629 ERA GO:0000028,GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006152,GO:0006163,GO:0006184,GO:0006195,GO:0006464,GO:0006468,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009056,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009150,GO:0009154,GO:0009164,GO:0009166,GO:0009199,GO:0009203,GO:0009205,GO:0009207,GO:0009259,GO:0009261,GO:0009987,GO:0016020,GO:0016043,GO:0016310,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0019439,GO:0019538,GO:0019637,GO:0019693,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034622,GO:0034641,GO:0034655,GO:0035639,GO:0036094,GO:0036211,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0042278,GO:0042454,GO:0043021,GO:0043024,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044267,GO:0044270,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0044699,GO:0044710,GO:0044763,GO:0046039,GO:0046128,GO:0046130,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0072521,GO:0072523,GO:0097159,GO:1901068,GO:1901069,GO:1901135,GO:1901136,GO:1901265,GO:1901292,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901657,GO:1901658 bactNOG[38] 05CWT@bactNOG,1CACN@tenNOG,COG1159@NOG 05CWT|6.75085411325e-120|404.019592285 M An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism (By similarity) MMSYN1_0663 272632.MSC_0737 7.3e-84 267.5 RPMC map03010 bactNOG[38] 087Y8@bactNOG,0XUY5@NOG,1CAS8@tenNOG 087Y8|5.34459120425e-71|240.341903687 J 50s ribosomal protein l29 MMSYN1_0664 880447.MSB_A0707 4.6e-93 305 RPLP GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005623,GO:0005886,GO:0006412,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0019538,GO:0034645,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044464,GO:0071704,GO:0071944,GO:1901576 map03010 bactNOG[38] 08R70@bactNOG,1CABS@tenNOG,COG0197@NOG 08R70|1.56105786641e-65|222.266265869 J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs (By similarity) MMSYN1_0536 272632.MSC_0600 1.5e-114 375.9 FRR GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006412,GO:0006415,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0030312,GO:0032790,GO:0032984,GO:0032988,GO:0034645,GO:0040007,GO:0043021,GO:0043022,GO:0043170,GO:0043241,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0044699,GO:0044763,GO:0071704,GO:0071822,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901576 bactNOG[38] 08VCV@bactNOG,1CADS@tenNOG,COG0233@NOG 08VCV|8.18001670096e-62|210.815658569 J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another (By similarity) MMSYN1_0821 272632.MSC_0940 6.7e-202 660.4 HPRK bactNOG[38] 07UZ6@bactNOG,1CACC@tenNOG,COG1493@NOG 07UZ6|2.5756766493e-96|326.011993408 T Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) MMSYN1_0475 272632.MSC_0532 8.8e-215 702.1 LDH GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 map00010,map00270,map00620,map00640,map01100,map01110,map01120 bactNOG[38] 05C80@bactNOG,1CA6D@tenNOG,COG0039@NOG 1CA6D|2.92983726684e-147|492.763305664 C L-lactate dehydrogenase MMSYN1_0222 880447.MSB_A0270 0 1379.8 THRS GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 map00970 bactNOG[38] 05C22@bactNOG,1CA7H@tenNOG,COG0441@NOG 05C22|7.79438324551e-210|702.322265625 J threonyL-tRNA synthetase MMSYN1_0539 272632.MSC_0607 2.4e-182 600.5 TSF GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006414,GO:0008135,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0019538,GO:0030312,GO:0034645,GO:0040007,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901576 bactNOG[38] 05CU7@bactNOG,1CA9V@tenNOG,COG0264@NOG 05CU7|2.57253631426e-103|349.077545166 J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome (By similarity) MMSYN1_0148 880447.MSB_A0201 1e-90 297.1 RPSL GO:0000372,GO:0000375,GO:0000376,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006396,GO:0006412,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009058,GO:0009059,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0015935,GO:0016070,GO:0019219,GO:0019222,GO:0019538,GO:0019843,GO:0022626,GO:0022627,GO:0030529,GO:0031323,GO:0031325,GO:0032991,GO:0033120,GO:0034336,GO:0034337,GO:0034641,GO:0034645,GO:0040007,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043484,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576 map03010 bactNOG[38] 08UKE@bactNOG,1CAB1@tenNOG,COG0048@NOG 08UKE|9.93246674322e-69|233.022979736 J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit (By similarity) MMSYN1_0774 880447.MSB_A0144 4.8e-57 177.1 SECG map03060,map03070 bactNOG[38] 072EP@bactNOG,0Z03A@NOG,1CATH@tenNOG 072EP|2.80103637052e-51|174.442474365 U preprotein translocase subunit SecG MMSYN1_0151 272632.MSC_0160 1.8e-267 883.4 TUF GO:0001666,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0008150,GO:0009628,GO:0010035,GO:0010038,GO:0010039,GO:0016020,GO:0030312,GO:0036293,GO:0040007,GO:0042221,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0070482,GO:0071944 map04626 bactNOG[38] 05CGV@bactNOG,1CA5H@tenNOG,COG0050@NOG 05CGV|6.29237893792e-221|736.086608887 J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (By similarity) MMSYN1_0776 880447.MSB_A0142 3.8e-91 298.9 SMPB GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0008150,GO:0008152,GO:0009987,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0070930,GO:0071704,GO:0097159,GO:1901363 bactNOG[38] 08UH4@bactNOG,1CAEE@tenNOG,COG0691@NOG 08UH4|3.53342858579e-59|203.542907715 O Binds specifically to the SsrA RNA (tmRNA) and is required for stable association of SsrA with ribosomes (By similarity) MMSYN1_0405 272632.MSC_0464 0 1027.9 GLYS GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0016874,GO:0016875,GO:0016876,GO:0044424,GO:0044464,GO:0046983 map00970 bactNOG[38] 05D9H@bactNOG,1CA5K@tenNOG,COG0423@NOG 05D9H|9.88752248212e-202|673.620605469 J Catalyzes the attachment of glycine to tRNA(Gly) (By similarity) MMSYN1_0107 272632.MSC_0102 5.5e-82 262.1 NUSB bactNOG[38] 068EC@bactNOG,0YSAG@NOG,1CAIS@tenNOG 068EC|9.47094818957e-40|138.603439331 K transcription antitermination factor nusb MMSYN1_0007 272632.MSC_0007 0 1824.2 GYRA GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 bactNOG[38] 05C24@bactNOG,1CA6K@tenNOG,COG0188@NOG 1CA6K|0.0|1201.29321289 L DNA gyrase negatively supercoils closed circular double- stranded DNA in an ATP-dependent manner and also catalyzes the interconversion of other topological isomers of double-stranded DNA rings, including catenanes and knotted rings (By similarity) MMSYN1_0081 880447.MSB_A0864 4.9e-278 918.1 MNME GO:0000166,GO:0001510,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006152,GO:0006163,GO:0006184,GO:0006195,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006805,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009056,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009150,GO:0009154,GO:0009164,GO:0009166,GO:0009199,GO:0009203,GO:0009205,GO:0009207,GO:0009259,GO:0009261,GO:0009268,GO:0009410,GO:0009451,GO:0009628,GO:0009636,GO:0009987,GO:0010467,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019439,GO:0019637,GO:0019693,GO:0030488,GO:0032259,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034470,GO:0034641,GO:0034655,GO:0034660,GO:0035639,GO:0036094,GO:0042221,GO:0042278,GO:0042454,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044270,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0044699,GO:0044710,GO:0044763,GO:0046039,GO:0046128,GO:0046130,GO:0046434,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0055086,GO:0070887,GO:0071466,GO:0071704,GO:0072521,GO:0072523,GO:0090304,GO:0097159,GO:1901068,GO:1901069,GO:1901135,GO:1901136,GO:1901265,GO:1901292,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901657,GO:1901658 bactNOG[38] 05C1H@bactNOG,1CA5S@tenNOG,COG0486@NOG 05C1H|3.79719353345e-134|451.301940918 S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 (By similarity) MMSYN1_0294 272632.MSC_0347 1.1e-53 175.3 RPSO GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006378,GO:0006396,GO:0006397,GO:0006412,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016070,GO:0016071,GO:0019538,GO:0019843,GO:0022626,GO:0022627,GO:0030529,GO:0031123,GO:0031124,GO:0032991,GO:0034641,GO:0034645,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043631,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576 map03010 bactNOG[38] 05K77@bactNOG,1CAGA@tenNOG,COG0184@NOG 05K77|1.58607081225e-33|117.699058533 J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome (By similarity) MMSYN1_0824 880447.MSB_A0813 0 2109.2 UVRA GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006152,GO:0006163,GO:0006195,GO:0006200,GO:0006259,GO:0006281,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009125,GO:0009126,GO:0009128,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009150,GO:0009154,GO:0009158,GO:0009161,GO:0009164,GO:0009166,GO:0009167,GO:0009169,GO:0009199,GO:0009203,GO:0009205,GO:0009207,GO:0009259,GO:0009261,GO:0009380,GO:0009381,GO:0009987,GO:0016462,GO:0016787,GO:0016788,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019439,GO:0019637,GO:0019693,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034641,GO:0034655,GO:0035639,GO:0036094,GO:0042278,GO:0042454,GO:0043167,GO:0043168,GO:0043170,GO:0043234,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044270,GO:0044281,GO:0044424,GO:0044464,GO:0044699,GO:0044710,GO:0044763,GO:0046034,GO:0046128,GO:0046130,GO:0046434,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0090304,GO:0090305,GO:0097159,GO:1901135,GO:1901136,GO:1901265,GO:1901292,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901657,GO:1901658 map03420 bactNOG[38] 05C5U@bactNOG,1CA5X@tenNOG,COG0178@NOG 1CA5X|0.0|1607.92248535 L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate (By similarity) MMSYN1_0426 272632.MSC_0486 0 1419.5 PSTA GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006139,GO:0006152,GO:0006163,GO:0006195,GO:0006200,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008509,GO:0009056,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009125,GO:0009126,GO:0009128,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009150,GO:0009154,GO:0009158,GO:0009161,GO:0009164,GO:0009166,GO:0009167,GO:0009169,GO:0009199,GO:0009203,GO:0009205,GO:0009207,GO:0009259,GO:0009261,GO:0009987,GO:0015075,GO:0015103,GO:0015114,GO:0015399,GO:0015405,GO:0015415,GO:0015698,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016820,GO:0016887,GO:0017111,GO:0019439,GO:0019637,GO:0019693,GO:0022804,GO:0022857,GO:0022891,GO:0022892,GO:0031224,GO:0031226,GO:0033554,GO:0034220,GO:0034641,GO:0034655,GO:0035435,GO:0040007,GO:0042278,GO:0042454,GO:0042623,GO:0042625,GO:0042626,GO:0043225,GO:0043492,GO:0044110,GO:0044116,GO:0044117,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044403,GO:0044419,GO:0044425,GO:0044459,GO:0044464,GO:0044699,GO:0044710,GO:0044763,GO:0044765,GO:0046034,GO:0046128,GO:0046130,GO:0046434,GO:0046483,GO:0046700,GO:0050896,GO:0051179,GO:0051234,GO:0051704,GO:0051716,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901657,GO:1901658 map02010 bactNOG[38] 05E2Z@bactNOG,1CA9X@tenNOG,COG0573@NOG,COG0581@NOG 1CA9X|6.4953552817e-245|816.946228027 P phosphate ABC transporter, permease MMSYN1_0316 272632.MSC_0372 0 1465 TKT map00030,map00710,map01051,map01100,map01110,map01120,map01230 bactNOG[38] 05CV1@bactNOG,1CA6C@tenNOG,COG0021@NOG 05CV1|1.69250047237e-273|913.475158691 G Transketolase (EC 2.2.1.1) MMSYN1_0537 880447.MSB_A0388 1.2e-148 489 PYRH GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006152,GO:0006163,GO:0006195,GO:0006200,GO:0006213,GO:0006220,GO:0006221,GO:0006225,GO:0006461,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009125,GO:0009126,GO:0009128,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009150,GO:0009154,GO:0009158,GO:0009161,GO:0009163,GO:0009164,GO:0009165,GO:0009166,GO:0009167,GO:0009169,GO:0009185,GO:0009188,GO:0009193,GO:0009194,GO:0009199,GO:0009203,GO:0009205,GO:0009207,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009261,GO:0009987,GO:0016020,GO:0016043,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019201,GO:0019205,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0022607,GO:0033862,GO:0034641,GO:0034654,GO:0034655,GO:0040007,GO:0042278,GO:0042454,GO:0042455,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0044710,GO:0046034,GO:0046048,GO:0046128,GO:0046130,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0046939,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055086,GO:0065003,GO:0070271,GO:0071704,GO:0071822,GO:0071840,GO:0071944,GO:0072521,GO:0072523,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901657,GO:1901658,GO:1901659 map00240,map01100 bactNOG[38] 05C41@bactNOG,1CA8I@tenNOG,COG0528@NOG 05C41|1.83199088773e-88|299.276916504 F Catalyzes the reversible phosphorylation of UMP to UDP (By similarity) MMSYN1_0819 880447.MSB_A0818 2.1e-203 664.9 TRXB GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 map00240,map00450 bactNOG[38] 05C3M@bactNOG,1CAB5@tenNOG,COG0492@NOG 1CAB5|1.54988092455e-130|437.456359863 O Thioredoxin reductase MMSYN1_0800 411470.RUMGNA_01605 1e-46 151.6 RPIB GO:0003674,GO:0003824,GO:0004751,GO:0005975,GO:0005996,GO:0008150,GO:0008152,GO:0008786,GO:0009056,GO:0016052,GO:0016853,GO:0016860,GO:0016861,GO:0019313,GO:0019314,GO:0019316,GO:0019318,GO:0019320,GO:0044238,GO:0044723,GO:0044724,GO:0046365,GO:0046367,GO:0071704,GO:1901575 map00030,map00052,map00710,map01100,map01110,map01120,map01230 bactNOG[38] 08YZG@bactNOG,0ET6B@cloNOG,0NJ8W@firmNOG,COG0698@NOG 0ET6B|4.44924495439e-62|213.613113403 G isomerase MMSYN1_0524 272632.MSC_0591 7.7e-198 652.4 RSMH GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:1901360 bactNOG[38] 05CGJ@bactNOG,1CAA9@tenNOG,COG0275@NOG 05CGJ|2.69303948437e-125|422.279907227 M Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA (By similarity) MMSYN1_0529 272632.MSC_0596 1.5e-224 741.1 PHES GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0016876,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044464,GO:0044710,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901576 map00970 bactNOG[38] 05CSS@bactNOG,1CA8T@tenNOG,COG0016@NOG 05CSS|1.90526379605e-128|432.208679199 J phenylalanyl-tRNA synthetase (alpha subunit) MMSYN1_0813 272632.MSC_0971 5.4e-213 703 bactNOG[38] 05CMR@bactNOG,1CAQI@tenNOG,COG1087@NOG 05CMR|6.78209889843e-120|404.348999023 M udp-glucose 4-epimerase MMSYN1_0665 272632.MSC_0739 3.9e-152 500.7 RPSC GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0019538,GO:0022626,GO:0022627,GO:0030312,GO:0030529,GO:0032991,GO:0034645,GO:0040007,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:1901576 map03010 bactNOG[38] 05CKE@bactNOG,1CA9P@tenNOG,COG0092@NOG 05CKE|7.10181512665e-87|293.428588867 J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation (By similarity) MMSYN1_0006 272632.MSC_0006 0 1404 GYRB GO:0000166,GO:0000287,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003916,GO:0003918,GO:0005488,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006152,GO:0006163,GO:0006195,GO:0006200,GO:0006259,GO:0006260,GO:0006261,GO:0006265,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0007059,GO:0008094,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009059,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009125,GO:0009126,GO:0009128,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009150,GO:0009154,GO:0009158,GO:0009161,GO:0009164,GO:0009166,GO:0009167,GO:0009169,GO:0009199,GO:0009203,GO:0009205,GO:0009207,GO:0009259,GO:0009261,GO:0009295,GO:0009987,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017076,GO:0017111,GO:0019439,GO:0019637,GO:0019693,GO:0030312,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034655,GO:0035639,GO:0036094,GO:0040007,GO:0042278,GO:0042454,GO:0042623,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044270,GO:0044281,GO:0044424,GO:0044464,GO:0044699,GO:0044710,GO:0044763,GO:0046034,GO:0046128,GO:0046130,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0055086,GO:0061505,GO:0071103,GO:0071704,GO:0071944,GO:0072521,GO:0072523,GO:0090304,GO:0097159,GO:1901135,GO:1901136,GO:1901265,GO:1901292,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 bactNOG[38] 05C7D@bactNOG,1CA87@tenNOG,COG0187@NOG 1CA87|2.01302703287e-306|1020.43939209 L DNA gyrase negatively supercoils closed circular double- stranded DNA in an ATP-dependent manner and also catalyzes the interconversion of other topological isomers of double-stranded DNA rings, including catenanes and knotted rings (By similarity) MMSYN1_0129 272632.MSC_0134 0 1172.7 PYRG GO:0003674,GO:0003824,GO:0003883,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006213,GO:0006220,GO:0006221,GO:0006241,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009208,GO:0009209,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016874,GO:0016879,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0040007,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0044710,GO:0046036,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 map00240,map01100 bactNOG[38] 05C8D@bactNOG,1CA6F@tenNOG,COG0504@NOG 05C8D|8.52377644765e-243|809.772460938 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen (By similarity) MMSYN1_0347 272632.MSC_0407 3.4e-116 382.7 CMK GO:0003674,GO:0003824,GO:0004127,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0019201,GO:0019205,GO:0019637,GO:0034641,GO:0040007,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044464,GO:0044710,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:1901360 map00240,map00410,map00770,map01100,map01110 bactNOG[38] 05CAT@bactNOG,1CADQ@tenNOG,COG0283@NOG 05CAT|5.93209426777e-76|259.626373291 F Cytidine monophosphate kinase MMSYN1_0526 272632.MSC_0593 8e-40 124.4 RPMF map03010 bactNOG[38] 082GS@bactNOG,0ZX13@NOG,1CAIE@tenNOG 082GS|1.16106454127e-29|104.899513245 J 50S ribosomal protein L32 MMSYN1_0443 272632.MSC_0503 2.1e-119 388.9 FTHC GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 map00670,map01100 bactNOG[38] 07XQK@bactNOG,1CAUG@tenNOG,COG0212@NOG 07XQK|5.76274111494e-56|192.32649231 H 5-formyltetrahydrofolate cyclo-ligase MMSYN1_0833 272632.MSC_0955 6.8e-93 298.7 RPLI map03010 bactNOG[38] 087V7@bactNOG,1CAIZ@tenNOG,COG0359@NOG 087V7|6.15470990238e-50|172.189453125 J Binds to the 23S rRNA (By similarity) MMSYN1_0290 272632.MSC_0336 9.5e-184 605.7 TRUB GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0030312,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:1901360 bactNOG[38] 05D0T@bactNOG,1CAE3@tenNOG,COG0130@NOG 05D0T|2.9684510502e-77|263.616882324 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (By similarity) MMSYN1_0687 272632.MSC_0761 9.7e-304 1002.7 GATB GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 map00970,map01100 bactNOG[38] 05CHT@bactNOG,1CA7C@tenNOG,COG0064@NOG 05CHT|2.47301819518e-173|580.281311035 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) (By similarity) MMSYN1_0002 272632.MSC_0002 6.2e-228 746.3 DNAN GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 map00230,map00240,map01100,map03030,map03430,map03440 bactNOG[38] 0885N@bactNOG,1CAFC@tenNOG,COG0592@NOG 0885N|5.30820525439e-105|354.386657715 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (By similarity) MMSYN1_0228 272632.MSC_0268 0 1285.3 PDHD GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 map00010,map00020,map00260,map00280,map00620,map01100,map01110,map01120 bactNOG[38] 07QN2@bactNOG,1CA7Y@tenNOG,COG1249@NOG 1CA7Y|5.51217639672e-236|785.08782959 C dihydrolipoamide dehydrogenase MMSYN1_0149 272632.MSC_0158 1.3e-99 326.7 RPSG GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006417,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0015935,GO:0016020,GO:0016043,GO:0017148,GO:0019222,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030312,GO:0030529,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034622,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044699,GO:0044763,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051246,GO:0051248,GO:0060255,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0097159,GO:1901363,GO:1901576,GO:2000112,GO:2000113 map03010 bactNOG[38] 08UHY@bactNOG,1CAAX@tenNOG,COG0049@NOG 08UHY|2.1006076735e-70|238.417724609 J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA (By similarity) MMSYN1_0282 272632.MSC_0327 0 1063.7 PROS GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 map00970 bactNOG[38] 07R1M@bactNOG,1CA7M@tenNOG,COG0442@NOG 07R1M|2.44124745407e-208|695.454162598 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) (By similarity) MMSYN1_0027 880447.MSB_A0030 8e-83 263.3 RPSF map03010 bactNOG[38] 085KQ@bactNOG,1CAFJ@tenNOG,COG0360@NOG 085KQ|3.8474336911e-39|134.777786255 J Binds together with S18 to 16S ribosomal RNA (By similarity) MMSYN1_0427 880447.MSB_A0496 6.3e-171 563.2 PSTB GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006152,GO:0006163,GO:0006195,GO:0006200,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0008150,GO:0008152,GO:0008509,GO:0009056,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009125,GO:0009126,GO:0009128,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009150,GO:0009154,GO:0009158,GO:0009161,GO:0009164,GO:0009166,GO:0009167,GO:0009169,GO:0009199,GO:0009203,GO:0009205,GO:0009207,GO:0009259,GO:0009261,GO:0009987,GO:0015075,GO:0015103,GO:0015114,GO:0015399,GO:0015405,GO:0015415,GO:0015698,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016820,GO:0016887,GO:0017111,GO:0019439,GO:0019637,GO:0019693,GO:0022804,GO:0022857,GO:0022891,GO:0022892,GO:0034220,GO:0034641,GO:0034655,GO:0035435,GO:0042278,GO:0042454,GO:0042623,GO:0042625,GO:0042626,GO:0043225,GO:0043492,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044464,GO:0044699,GO:0044710,GO:0044763,GO:0044765,GO:0046034,GO:0046128,GO:0046130,GO:0046434,GO:0046483,GO:0046700,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901657,GO:1901658 map02010 bactNOG[38] 05BZY@bactNOG,1CA7N@tenNOG,COG1117@NOG 05BZY|1.0746719031e-121|408.966674805 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system (By similarity) MMSYN1_0095 272632.MSC_0089 0 2009.9 SECA GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006152,GO:0006163,GO:0006195,GO:0006200,GO:0006605,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006886,GO:0006950,GO:0006952,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009125,GO:0009126,GO:0009128,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009150,GO:0009154,GO:0009158,GO:0009161,GO:0009164,GO:0009166,GO:0009167,GO:0009169,GO:0009199,GO:0009203,GO:0009205,GO:0009207,GO:0009259,GO:0009261,GO:0009306,GO:0009579,GO:0009607,GO:0009987,GO:0015031,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019439,GO:0019637,GO:0019693,GO:0020012,GO:0030312,GO:0030554,GO:0030682,GO:0031522,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032940,GO:0032991,GO:0033036,GO:0034357,GO:0034613,GO:0034641,GO:0034655,GO:0035639,GO:0036094,GO:0040007,GO:0042278,GO:0042454,GO:0042651,GO:0043167,GO:0043168,GO:0043234,GO:0043952,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044436,GO:0044444,GO:0044464,GO:0044699,GO:0044710,GO:0044763,GO:0044765,GO:0045184,GO:0046034,GO:0046128,GO:0046130,GO:0046434,GO:0046483,GO:0046700,GO:0046903,GO:0046907,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051701,GO:0051704,GO:0051707,GO:0051805,GO:0051807,GO:0051832,GO:0051834,GO:0052059,GO:0052173,GO:0052200,GO:0052385,GO:0052550,GO:0052564,GO:0052567,GO:0052572,GO:0055085,GO:0055086,GO:0065002,GO:0070727,GO:0071702,GO:0071704,GO:0071806,GO:0071944,GO:0072521,GO:0072523,GO:0075136,GO:0097159,GO:1901135,GO:1901136,GO:1901265,GO:1901292,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901657,GO:1901658 map03060,map03070 bactNOG[38] 05CI6@bactNOG,1CA8H@tenNOG,COG0653@NOG 1CA8H|0.0|1202.80944824 U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane (By similarity) MMSYN1_0406 272632.MSC_0465 0 1238.4 DNAG GO:0003674,GO:0003824,GO:0003896,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006269,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0040007,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0071944,GO:0090304,GO:1901360,GO:1901362,GO:1901576 map03030 bactNOG[38] 05C9G@bactNOG,1CAAJ@tenNOG,COG0358@NOG 05C9G|3.7096157077e-130|438.231109619 L DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments on both template strands at replication forks during chromosomal DNA synthesis (By similarity) MMSYN1_0647 880447.MSB_A0690 1.8e-74 243.8 RPSM GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030529,GO:0032991,GO:0034645,GO:0042254,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:0071944,GO:1901576 map03010 bactNOG[38] 08Z04@bactNOG,1CABX@tenNOG,COG0099@NOG 08Z04|1.70012430218e-60|206.231826782 J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits MMSYN1_0519 272632.MSC_0585 0 2049.6 ILES GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 map00970 bactNOG[38] 05C07@bactNOG,1CA70@tenNOG,COG0060@NOG 05C07|1.26829671259e-273|913.300354004 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) (By similarity) MMSYN1_0203 880447.MSB_A0250 3.1e-194 639.8 GMK GO:0000166,GO:0000287,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0004017,GO:0004385,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0017076,GO:0019001,GO:0019002,GO:0019003,GO:0019201,GO:0019205,GO:0019637,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0034641,GO:0035639,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044464,GO:0044710,GO:0046483,GO:0046872,GO:0046939,GO:0055086,GO:0071704,GO:0097159,GO:1901265,GO:1901360,GO:1901363 map00230,map01100 bactNOG[38] 08UHA@bactNOG,1CAAB@tenNOG,COG0194@NOG 08UHA|1.48614335901e-96|326.497070312 F Essential for recycling GMP and indirectly, cGMP (By similarity) MMSYN1_0300 272632.MSC_0352 0 1189.1 NUSA GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006351,GO:0006353,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016020,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0030312,GO:0031323,GO:0031326,GO:0031554,GO:0031555,GO:0031564,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0040007,GO:0043170,GO:0043244,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:2000112,GO:2001141 bactNOG[38] 05CHV@bactNOG,1CAD9@tenNOG,COG0195@NOG 05CHV|9.77965573429e-120|403.404846191 K Transcription elongation factor NusA MMSYN1_0655 272632.MSC_0729 4.6e-73 238.5 RPLR GO:0003674,GO:0003735,GO:0005198,GO:0006412,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034645,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0071704,GO:1901576 map03010 bactNOG[38] 05K4C@bactNOG,1CADY@tenNOG,COG0256@NOG 05K4C|1.10303939159e-48|167.702178955 J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance (By similarity) MMSYN1_0061 272632.MSC_0066 3.7e-275 908.3 SERS GO:0000287,GO:0001887,GO:0003674,GO:0003824,GO:0004812,GO:0004828,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006434,GO:0006520,GO:0006575,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009059,GO:0009069,GO:0009070,GO:0009987,GO:0010467,GO:0016053,GO:0016070,GO:0016259,GO:0016260,GO:0016874,GO:0016875,GO:0016876,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0042398,GO:0043038,GO:0043039,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044710,GO:0044711,GO:0046394,GO:0046483,GO:0046872,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 map00970 bactNOG[38] 05CGR@bactNOG,1CA82@tenNOG,COG0172@NOG 05CGR|9.79378638419e-170|567.965087891 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) (By similarity) MMSYN1_0147 272632.MSC_0156 0 1119.6 CLS map00564,map01100 bactNOG[38] 07RBF@bactNOG,1CABH@tenNOG,COG1502@NOG 07RBF|4.40108049408e-178|595.837463379 I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol (By similarity) MMSYN1_0661 272632.MSC_0735 3.7e-75 246.1 RPLN GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0030529,GO:0032991,GO:0034645,GO:0040007,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901576 map03010 bactNOG[38] 08UNN@bactNOG,1CAC6@tenNOG,COG0093@NOG 08UNN|1.01238717455e-54|186.939407349 J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome (By similarity) MMSYN1_0613 272632.MSC_0686 7.7e-273 900.6 TYRS GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006437,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0016876,GO:0019538,GO:0019752,GO:0030312,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0044710,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:1901360,GO:1901564,GO:1901576 map00970 bactNOG[38] 05DA0@bactNOG,1CA76@tenNOG,COG0162@NOG 05DA0|4.85931543626e-148|497.181640625 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) (By similarity) MMSYN1_0434 880447.MSB_A0489 7.6e-287 945.5 TRMFO GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 bactNOG[38] 07QXI@bactNOG,1CA8V@tenNOG,COG1206@NOG 07QXI|9.87294170815e-174|581.103515625 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs (By similarity) MMSYN1_0404 272632.MSC_0463 2.4e-158 515.5 RECO map03440 bactNOG[38] 0687G@bactNOG,1CAI3@tenNOG,COG1381@NOG 0687G|1.26931278664e-65|224.39616394 L Involved in DNA repair and RecF pathway recombination (By similarity) MMSYN1_0795 880447.MSB_A0128 1.8e-58 186.4 ATPE GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 map00190,map00195,map01100 bactNOG[38] 082I9@bactNOG,0ZXJ4@NOG,1CAIG@tenNOG 082I9|9.70551798933e-28|98.6097335815 C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation (By similarity) MMSYN1_0378 880447.MSB_A0549 8.3e-160 522.7 NADE map00760,map01100 bactNOG[38] 07RW9@bactNOG,1CABC@tenNOG,COG0171@NOG 07RW9|5.91454505814e-82|278.664031982 H nh(3)-dependent nad( ) synthetase MMSYN1_0297 272632.MSC_0349 0 1321.1 INFB GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044424,GO:0044464,GO:0071944 bactNOG[38] 07EEM@bactNOG,1CA60@tenNOG,COG0532@NOG 07EEM|1.10956018817e-254|850.48449707 J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex (By similarity) MMSYN1_0366 272632.MSC_0429 7.5e-202 664.4 YLQF GO:0003674,GO:0003824,GO:0003924,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006152,GO:0006163,GO:0006184,GO:0006195,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009150,GO:0009154,GO:0009164,GO:0009166,GO:0009199,GO:0009203,GO:0009205,GO:0009207,GO:0009259,GO:0009261,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0019439,GO:0019637,GO:0019693,GO:0022613,GO:0034641,GO:0034655,GO:0042254,GO:0042278,GO:0042454,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044424,GO:0044464,GO:0044710,GO:0046039,GO:0046128,GO:0046130,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0071840,GO:0072521,GO:0072523,GO:1901068,GO:1901069,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901657,GO:1901658 bactNOG[38] 05C9W@bactNOG,1CAE2@tenNOG,COG1161@NOG 05C9W|1.82144973061e-94|320.029602051 K Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity (By similarity) MMSYN1_0726 272632.MSC_0821 2.4e-155 510.3 NAGB map00520,map01100,map01110 bactNOG[38] 05CKA@bactNOG,1CAEM@tenNOG,COG0363@NOG 05CKA|4.08539975751e-107|362.109619141 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion (By similarity) MMSYN1_0525 272632.MSC_0592 6.3e-88 282.6 MRAZ bactNOG[38] 08439@bactNOG,1CAH9@tenNOG,COG2001@NOG 08439|3.19075826676e-50|172.687850952 S Cell division protein mraZ MMSYN1_0653 272632.MSC_0727 2.3e-91 299.7 RPLO GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005623,GO:0005886,GO:0006412,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0019538,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044464,GO:0071704,GO:0071944,GO:1901576 map03010 bactNOG[38] 08UZ0@bactNOG,1CAG9@tenNOG,COG0200@NOG 08UZ0|8.71448929982e-60|205.128341675 J Binds to the 23S rRNA (By similarity) MMSYN1_0544 272632.MSC_0612 1.2e-214 707.2 HRCA GO:0005575,GO:0005623,GO:0005886,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:2000112,GO:2000113,GO:2001141 bactNOG[38] 05CI8@bactNOG,1CADH@tenNOG,COG1420@NOG 05CI8|1.25450348009e-76|261.233001709 K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons (By similarity) MMSYN1_0365 880447.MSB_A0564 2e-78 256.6 RPLS GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005623,GO:0005886,GO:0006412,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0019538,GO:0034645,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044464,GO:0071704,GO:0071944,GO:1901576 map03010 bactNOG[38] 08YY1@bactNOG,1CADG@tenNOG,COG0335@NOG 08YY1|2.32488157161e-50|174.260269165 J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site (By similarity) MMSYN1_0216 272632.MSC_0256 3.6e-126 414.7 HPT GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 map00230,map00983,map01100,map01110 bactNOG[38] 08UGV@bactNOG,1CAC2@tenNOG,COG0634@NOG 08UGV|1.23751392528e-58|201.358276367 F hypoxanthine phosphoribosyltransferase MMSYN1_0419 272632.MSC_0480 2.8e-215 709.2 PLSX GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006629,GO:0006644,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044464,GO:0044710,GO:0071704,GO:0090407,GO:1901576 map00561,map00564,map01100 bactNOG[38] 05C6B@bactNOG,1CAAR@tenNOG,COG0416@NOG 05C6B|1.85266117962e-118|399.350921631 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA (By similarity) MMSYN1_0001 272632.MSC_0001 6.8e-285 940.7 DNAA GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006152,GO:0006163,GO:0006164,GO:0006172,GO:0006195,GO:0006200,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006275,GO:0006461,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009059,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009125,GO:0009126,GO:0009127,GO:0009128,GO:0009132,GO:0009133,GO:0009135,GO:0009136,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009150,GO:0009152,GO:0009154,GO:0009156,GO:0009158,GO:0009161,GO:0009163,GO:0009164,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009169,GO:0009179,GO:0009180,GO:0009185,GO:0009188,GO:0009199,GO:0009203,GO:0009205,GO:0009207,GO:0009259,GO:0009260,GO:0009261,GO:0009889,GO:0009987,GO:0010556,GO:0016020,GO:0016043,GO:0016311,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0022607,GO:0030312,GO:0030554,GO:0031323,GO:0031326,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0035639,GO:0036094,GO:0042278,GO:0042451,GO:0042454,GO:0042455,GO:0043167,GO:0043168,GO:0043170,GO:0043565,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044270,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044710,GO:0046031,GO:0046034,GO:0046128,GO:0046129,GO:0046130,GO:0046390,GO:0046434,GO:0046483,GO:0046700,GO:0050789,GO:0050794,GO:0051052,GO:0051171,GO:0051259,GO:0051260,GO:0055086,GO:0060255,GO:0065003,GO:0065007,GO:0070271,GO:0071704,GO:0071822,GO:0071840,GO:0071944,GO:0072521,GO:0072522,GO:0072523,GO:0080090,GO:0090304,GO:0090407,GO:0097159,GO:1901135,GO:1901136,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901657,GO:1901658,GO:1901659,GO:2000112 map02020,map04112 bactNOG[38] 05CI4@bactNOG,1CAC7@tenNOG,COG0593@NOG 05CI4|4.10443836265e-119|401.915527344 L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids (By similarity) MMSYN1_0064 272632.MSC_0069 0 1113 LYSS GO:0003674,GO:0003824,GO:0004812,GO:0004824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006430,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0016876,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044464,GO:0044710,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901576 map00970 bactNOG[38] 05CRK@bactNOG,1CA5V@tenNOG,COG1190@NOG 05CRK|3.47889445451e-248|830.097961426 J lysyL-tRNA synthetase MMSYN1_0528 272632.MSC_0595 0 1642.3 PHET GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 map00970 bactNOG[38] 082SH@bactNOG,1CA8Q@tenNOG,COG0072@NOG,COG0073@NOG 082SH|2.95445743616e-220|736.360595703 J phenylalanyl-tRNA synthetase (beta MMSYN1_0668 272632.MSC_0742 1.5e-189 624.7 RPLB GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0005886,GO:0006412,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0030529,GO:0032991,GO:0034645,GO:0040007,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0071704,GO:0071944,GO:1901576 map03010 bactNOG[38] 05CFD@bactNOG,1CA8N@tenNOG,COG0090@NOG 05CFD|8.04420321889e-133|444.731628418 J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity MMSYN1_0391 272632.MSC_0451 5.8e-120 394.1 EFP GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901576 bactNOG[38] 05DRH@bactNOG,1CACK@tenNOG,COG0231@NOG 05DRH|2.6481154234e-63|215.954620361 J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase (By similarity) MMSYN1_0428 272632.MSC_0488 2.1e-138 446.8 PHOU bactNOG[38] 0895U@bactNOG,1CAPX@tenNOG,COG0704@NOG 0895U|1.72956894834e-122|410.324951172 P phosphate transport system MMSYN1_0065 272632.MSC_0072 5.3e-68 217.8 TRXA bactNOG[38] 05NGQ@bactNOG,1CAJ1@tenNOG,COG0526@NOG 05NGQ|1.16359328569e-33|117.881721497 O Thioredoxin MMSYN1_0804 272632.MSC_1008 0 2806.1 RPOB map00230,map00240,map01100,map03020 bactNOG[38] 08H06@bactNOG,1CB15@tenNOG,COG0085@NOG 08H06|0.0|2942.10205078 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity) MMSYN1_0328 272632.MSC_0386 1.8e-133 438.3 SCPB GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 bactNOG[38] 05K8I@bactNOG,1CAFX@tenNOG,COG1386@NOG 05K8I|1.98200474499e-43|151.781311035 K Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves (By similarity) MMSYN1_0137 272632.MSC_0146 3.2e-62 197.4 RPME map03010 bactNOG[38] 082EV@bactNOG,1CAHT@tenNOG,COG0254@NOG 082EV|1.03183799539e-30|108.0887146 J 50s ribosomal protein l31 MMSYN1_0501 1027292.HMPREF9372_2815 1e-35 118.3 RPLU GO:0003674,GO:0003735,GO:0005198,GO:0006412,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0071704,GO:1901576 map03010 bactNOG[38] 04VKR@bacNOG,05KK9@bactNOG,0NKSY@firmNOG,COG0261@NOG 05KK9|1.30948431884e-40|142.879943848 J This protein binds to 23S rRNA in the presence of protein L20 (By similarity) MMSYN1_0079 272632.MSC_0083 1.9e-207 683.7 GCP GO:0001948,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009116,GO:0009119,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0034470,GO:0034641,GO:0034660,GO:0042278,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0044710,GO:0046085,GO:0046128,GO:0046483,GO:0055086,GO:0070011,GO:0070525,GO:0070526,GO:0071704,GO:0072521,GO:0090304,GO:1901135,GO:1901360,GO:1901564,GO:1901657 bactNOG[38] 05CPM@bactNOG,1CAA0@tenNOG,COG0533@NOG 05CPM|2.39767209107e-139|469.431915283 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine (By similarity) MMSYN1_0271 272632.MSC_0312 1e-117 381.1 YEAZ bactNOG[38] 07HHA@bactNOG,1CAIQ@tenNOG,COG1214@NOG 07HHA|3.83688759797e-54|186.346328735 O Glycoprotease family MMSYN1_0213 272632.MSC_0253 3.3e-298 984.8 ENO GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0009986,GO:0044424,GO:0044464 map00010,map00680,map01100,map01110,map01120,map01230,map03018,map04066 bactNOG[38] 05C70@bactNOG,1CA6P@tenNOG,COG0148@NOG 05C70|1.71863498077e-214|715.624267578 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis (By similarity) MMSYN1_0025 272632.MSC_0025 1.1e-46 151.8 RPSR GO:0003674,GO:0003735,GO:0005198,GO:0006412,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0071704,GO:1901576 map03010 bactNOG[38] 05VH8@bactNOG,1CAHP@tenNOG,COG0238@NOG 05VH8|2.83153122334e-33|116.974334717 J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit (By similarity) MMSYN1_0131 272632.MSC_0139 4.4e-205 670.2 FBA map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01230 bactNOG[38] 05D2N@bactNOG,1CA5I@tenNOG,COG0191@NOG 1CA5I|8.15053441928e-143|477.523254395 G aldolase MMSYN1_0453 272632.MSC_0511 0 1909.7 PARC GO:0003674,GO:0003824,GO:0003916,GO:0003918,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006152,GO:0006163,GO:0006195,GO:0006200,GO:0006259,GO:0006260,GO:0006261,GO:0006265,GO:0006276,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0008094,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009059,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009125,GO:0009126,GO:0009128,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009150,GO:0009154,GO:0009158,GO:0009161,GO:0009164,GO:0009166,GO:0009167,GO:0009169,GO:0009199,GO:0009203,GO:0009205,GO:0009207,GO:0009259,GO:0009261,GO:0009295,GO:0009330,GO:0009340,GO:0009987,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017111,GO:0019439,GO:0019637,GO:0019693,GO:0019897,GO:0019898,GO:0022402,GO:0030541,GO:0032991,GO:0034641,GO:0034645,GO:0034655,GO:0042278,GO:0042454,GO:0042623,GO:0043170,GO:0043234,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044270,GO:0044281,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0044699,GO:0044710,GO:0044763,GO:0046034,GO:0046128,GO:0046130,GO:0046434,GO:0046483,GO:0046700,GO:0051276,GO:0055086,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0072521,GO:0072523,GO:0090304,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 bactNOG[38] 05C24@bactNOG,1CA8R@tenNOG,COG0188@NOG 1CA8R|0.0|1157.51550293 L DNA topoisomerase IV, subunit A MMSYN1_0381 272632.MSC_0443 5.5e-115 372.8 MTNN map00270,map01100 bactNOG[38] 084IM@bactNOG,1CAJW@tenNOG,COG0775@NOG 084IM|3.36656418606e-64|219.006729126 F nucleosidase MMSYN1_0303 272632.MSC_0355 0 3304.5 POLC GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 map00230,map00240,map01100,map03030,map03430,map03440 bactNOG[38] 07S1V@bactNOG,1CA64@tenNOG,COG2176@NOG 07S1V|0.0|1913.01098633 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity (By similarity) MMSYN1_0201 880447.MSB_A0248 5.1e-135 439.8 DEF bactNOG[38] 07YB9@bactNOG,1CAFV@tenNOG,COG0242@NOG 07YB9|9.86131947219e-68|230.332336426 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions (By similarity) MMSYN1_0229 272632.MSC_0269 3.2e-214 699.3 PTA GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 map00430,map00620,map00640,map00680,map00720,map01100,map01120 bactNOG[38] 07ZCE@bactNOG,1CABD@tenNOG,COG0280@NOG 07ZCE|1.9905790297e-130|437.646697998 C phosphate acetyltransferase MMSYN1_0047 272632.MSC_0048 0 1311.6 DNAX GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:1901360 map00230,map00240,map01100,map03030,map03430,map03440 bactNOG[38] 07XK4@bactNOG,1CAA5@tenNOG,COG2812@NOG 07XK4|1.91798707006e-164|551.825561523 L dna polymerase iii subunits gamma and tau MMSYN1_0803 272632.MSC_1009 0 2730.6 RPOC GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030312,GO:0032774,GO:0034062,GO:0034641,GO:0034654,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:1901360,GO:1901362,GO:1901576 map00230,map00240,map01100,map03020 bactNOG[38] 05D27@bactNOG,1CA5U@tenNOG,COG0086@NOG 05D27|0.0|1885.74206543 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity) MMSYN1_0004 272632.MSC_0004 1.6e-160 528.7 RSMA GO:0000028,GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003723,GO:0003729,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0031167,GO:0032259,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043170,GO:0043412,GO:0043414,GO:0043566,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0044699,GO:0044763,GO:0046483,GO:0065003,GO:0070475,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363 bactNOG[38] 05D1X@bactNOG,1CACV@tenNOG,COG0030@NOG 05D1X|1.6618812387e-79|271.425720215 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (By similarity) MMSYN1_0012 272632.MSC_0012 0 1099.9 METG GO:0003674,GO:0003824,GO:0004812,GO:0004825,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008150,GO:0008152,GO:0016020,GO:0016874,GO:0016875,GO:0016876,GO:0040007,GO:0044424,GO:0044464,GO:0071944 map00450,map00970 bactNOG[38] 05CKH@bactNOG,1CA7W@tenNOG,COG0143@NOG 05CKH|4.00170376967e-194|650.690185547 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (By similarity) MMSYN1_0230 880447.MSB_A0278 4.2e-258 851.7 ACKA GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 map00430,map00620,map00640,map00680,map00720,map01100,map01120 bactNOG[38] 05C6H@bactNOG,1CA69@tenNOG,COG0282@NOG 05C6H|8.55126818714e-164|549.72265625 C Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction (By similarity) MMSYN1_0794 272632.MSC_0889 1.5e-106 343.7 ATPF GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 map00190,map00195,map01100 bactNOG[38] 06CUG@bactNOG,1CAIT@tenNOG,COG0711@NOG 06CUG|5.13176057413e-55|188.607376099 C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation (By similarity) MMSYN1_0648 880447.MSB_A0691 7.9e-23 72.3 RPMJ GO:0003674,GO:0003735,GO:0005198,GO:0006412,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0071704,GO:1901576 map03010 bactNOG[38] 067V7@bactNOG,1CAJ3@tenNOG,COG0257@NOG 067V7|1.04221808581e-20|76.0898132324 J 50S ribosomal protein L36 MMSYN1_0432 880447.MSB_A0491 1.9e-261 862.9 METK GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 map00270,map01100,map01110 bactNOG[38] 05CPH@bactNOG,1CA7K@tenNOG,COG0192@NOG 05CPH|1.80395195981e-185|620.897827148 H Catalyzes the formation of S-adenosylmethionine from methionine and ATP MMSYN1_0662 272632.MSC_0736 4.5e-53 172.6 RPSQ GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005623,GO:0005886,GO:0006412,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0019538,GO:0034645,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044464,GO:0071704,GO:0071944,GO:1901576 map03010 bactNOG[38] 05K87@bactNOG,1CAFH@tenNOG,COG0186@NOG 05K87|2.30739316449e-40|141.061386108 J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal MMSYN1_0670 272632.MSC_0744 7.4e-134 439.7 RPLD GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0019538,GO:0034645,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071944,GO:1901576 map03010 bactNOG[38] 06U5A@bactNOG,1CAAE@tenNOG,COG0088@NOG 06U5A|4.21825734834e-91|309.00100708 J One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity) ############################################################################################################### ############# TrSSP Functional class: Equivalog FINISH ###############################################################################################################